Gambusia affinis (western mosquitofish): 122840555
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Entry
122840555 CDS
T07758
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122840555 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122840555 (rpap2)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122840555 (rpap2)
Protein phosphatases and associated proteins [BR:
gaf01009
]
HAD phosphatases
Fcp/Scp phosphatases
122840555 (rpap2)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122840555 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
S-antigen
Motif
Other DBs
NCBI-GeneID:
122840555
NCBI-ProteinID:
XP_043988989
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Position
LG12:complement(2633612..2643194)
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AA seq
584 aa
AA seq
DB search
METEERRRRGGSAKSSKKGGKCVKVRTAEEEARRREEVKERLREKLELERRALEVVERLL
EDSVAEDFLIDCAKLITPANYKDTVEERFIAKLCGYPVCPNKLGKIPNQRFKISTKTNRV
YDITERKCFCSNFCYKASKHYELQISKTPLWLRQHESPPEVRLLKKGDGGSSGEEVLLSD
RRLKKEDIEDPPTAPPQDPPGSERSAAGSDLSQSGDSEQEQDFVSSVVPQRRRAQVSWAD
LPEHTDGDGKQSEQRQIDDTEERGRAGGEDAFPENRPVEEAAAKLNECSVSESVHPNSEL
LETGSKQAPNPAALSITRVGMSQRGAAGLRDLLNTHTGEANPVTVRLNLLACLRRTLKEW
CTDDTLSFLYGADHSLESPLSNLKETQEEELDEDDLEDDNVTEPGAEERDRGRSAAAPDY
ETLRKETERLQLRVTEFYRGTWILPEEEEEMKLSKETESKDPVLPLIDSQAQNLIQKRIT
VEKLSSCLRNVVGPVGLTMSDISTDLNNLVRTFRFSNTNIIHKTPEWTLIAVVLLHLLSF
VSPVVRDALEVSASAQYLDSLMEELGLQQHDLRSVVELFKSSAN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagagaggaggaggagaggaggttctgctaaaagctccaaaaaaggtggg
aaatgtgtcaaagtacggaccgccgaagaagaagcgaggaggagagaggaggtgaaggag
aggctgagggagaagctggagctggagaggagagccctggaggtagtggagcgcctccta
gaggacagcgtggctgaagacttcctgattgactgtgccaagctcataactcctgctaac
tacaaagacacagtggaggagagattcatcgccaaactgtgtggttatcctgtatgtcca
aacaaactgggcaagatcccaaatcaacggtttaaaatatctaccaaaacaaaccgggtc
tatgacatcacagagcggaagtgtttttgcagcaacttctgctacaaagcttccaaacac
tatgagctgcagatatcgaagacgcctctttggctcaggcagcatgaaagtcccccagag
gtgaggttgctgaagaaaggagatggtgggagctctggtgaggaggtgctgctgtccgat
aggcgcctcaaaaaggaggacatcgaggaccccccgaccgccccgcctcaggaccctcct
ggctccgagcgcagcgccgcaggaagtgacctcagtcaaagcggcgacagcgaacaggag
caggacttcgtctccagcgtggttccccagcgccggagagcccaggtgagctgggctgac
ctgcccgaacacacggacggagacgggaagcagagcgagcagcgacagattgatgacact
gaggagagggggagagcaggaggagaggacgcgtttcctgagaacagacctgtggaggag
gccgcagcaaagctgaacgagtgtagcgtgtcagagagcgtccaccccaactctgagctg
ctggaaactggaagcaaacaggctccaaacccggcggctctcagcatcacccgggtgggg
atgagccagagaggagcagctgggctgcgggatctcctgaacacccacactggagaagcc
aatcctgtcacggtgcggctcaatctgctggcgtgcctgaggaggacgctaaaggagtgg
tgcacagacgacactctgagcttcctgtacggagccgaccattctctggaatccccgtta
tccaacctaaaggaaacgcaggaagaagagctggacgaagatgacctcgaggatgacaac
gtgacggagccaggcgccgaagagcgggacagggggcggtcggctgcagctccggactac
gagacgctgaggaaggagacggagcggctgcagctcagagtcacagagttttacagaggg
acgtggattctgcctgaggaggaggaggagatgaagctcagcaaggagacagaatcaaag
gatccagttttgccactgattgattcccaggctcagaacctcatccagaaacggattaca
gtggagaaactcagcagctgtctcaggaacgtcgtaggtccggtgggcctcaccatgagt
gacatctccacggacctgaacaacctggtcaggactttcaggttcagcaacaccaacatc
atccacaaaaccccagagtggacgctgatagctgtggtgcttctgcatctgctgtccttc
gtgtctccggtggtgcgggacgccctggaggtgtcggcatcagcgcagtatttggactct
ctgatggaggagctcggcctgcagcagcacgaccttcgcagcgtggttgagctctttaaa
tcctcagcaaactga
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