Gambusia affinis (western mosquitofish): 122840561
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Entry
122840561 CDS
T07758
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122840561 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122840561 (gtf2b)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122840561 (gtf2b)
Prokaryotic type
Archaeal type
TFB
122840561 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
122840561
NCBI-ProteinID:
XP_043989002
LinkDB
All DBs
Position
LG12:2725999..2733638
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AA seq
318 aa
AA seq
DB search
MASTSRGESLALPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISRGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgagtcgtggagaatctctggccttacccaaagttcagtgtcccaaccat
cctgatgcgttactggtggaggactacagggcaggcgacatgatttgtcctgaatgtggc
cttgttgttggtgaccgtgtgatcgacgtgggctccgagtggaggacgttttctaatgag
aaggctctcaaagacccgtccagagtgggagacgctcagaaccccctgctcaacggagga
gacctgaccaccatgatcagcaggggaacgggcgcggccagcttcgacgagttcggcaac
tcaaagtaccagaaccggcggaccatgagcagctctgaccgggccatgctgaacgccttc
aaagagatcagcaccatggcggatcgcatcaacctgccgagaaacatcgtagacagaaca
aacaacctgttcaagcaggtttatgagcagaagagtctgaaggggcgagccaacgatgcc
atcgcctcagcctgcctctacatcgcctgcagacaagagggcgtaccaaggacatttaaa
gagatctgcgccgtctccaggatctcaaagaaggagatcggcaggtgcttcaagctgatc
ctgaaggctctggagaccagcgtggacctcatcaccacgggagacttcatgtcccgcttc
tgctccaacctgggcctgccgaagcaggtgcaaatggccgccaccttcatcgccaggaaa
gccgtggagctggacctggtgcccggcaggagccccatctcggtggccgctgcagccatc
tacatggcctcccaggcctccgctgagaagaagacccagaaagaaatcggcgacatcgct
ggcgttgccgacgtcaccatcagacagtcctaccgactcatctatccacgcgcagcagaa
cttttccctccagactttaagtttgatacgcctgttgataaactgcctcaactgtga
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integrated database retrieval system
