Gambusia affinis (western mosquitofish): 122840569
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Entry
122840569 CDS
T07758
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
gaf03410
Base excision repair
gaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122840569 (zgc:110269)
03410 Base excision repair
122840569 (zgc:110269)
03450 Non-homologous end-joining
122840569 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122840569 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122840569 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122840569 (zgc:110269)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122840569 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122840569 (zgc:110269)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122840569 (zgc:110269)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122840569 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
SfmD_perox
HHH_5
Motif
Other DBs
NCBI-GeneID:
122840569
NCBI-ProteinID:
XP_043989010
LinkDB
All DBs
Position
LG12:2869128..2875135
Genome browser
AA seq
348 aa
AA seq
DB search
MGITKLADLIRSDAPNAVSYKDISDYTGKVIALDTSVVLNQFRAKTPSLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPVEKTPVLERRAEAAGRRFPKRTGEASSQTKDSIELLKRMGVP
VIQAPGDAEAQCARLVRDGVVDAVASEDMDTLPFGANVLIRQLNAKKDSEVVEYSLPTLL
EKLQITREELVDLCILLGCDYCDKIPGLGPKKALTLIQKHRTIENVVLHINSQTHPVPLV
WKYKEARKIFLDETESPAPDLAWRELDEEAVVDFLCHTKHVREERIRHRMKTFHEHRENR
REERKKEKAAGRMRQTRMDYFFRVTRKRGQPVESLSSLETQRRIMKTY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggattactaaactggctgatttaattcgttctgatgctccaaatgcagtttcttat
aaggacatcagtgactatacagggaaagtcatcgccttggatacctcagtggttctgaac
cagtttcgagcaaaaacaccctctttgagccctctaactggactctttttccgcacactg
accttcctggaacacgacataaagccggtctttgtatttgatggaaagcctcccgtggaa
aagacacctgttctggagaggcgagccgaggcagctggtcggaggttccccaaaagaaca
ggagaagcatcatcccagactaaggattccattgagctactgaaacgtatgggtgtgcct
gtcatccaggctccaggggacgctgaagcgcagtgtgcccggctggtgagagacggggtt
gtggatgcagtggcctccgaggacatggacacgctgccctttggagcaaacgttctcatt
cgtcagctgaatgctaagaaggacagtgaagttgtggaatactcattacccacgctgctg
gaaaaactgcagattactcgtgaggagcttgttgacctttgtattctgctgggctgtgac
tactgcgacaagatccccggtttaggtccaaagaaagctctgactctcatccagaagcat
cgcactattgagaatgtggtgttgcacatcaacagtcagacccatcctgtacctcttgta
tggaaatacaaagaggccaggaagattttcttggacgaaacagaaagtccagctcctgac
ttggcgtggagggagctggacgaagaagccgtggtggacttcctgtgtcacaccaaacat
gtcagggaagagaggatccgtcatcgcatgaagacgtttcatgaacaccgagaaaatagg
cgagaggagaggaaaaaggagaaggcggcgggacgtatgagacagacgcgcatggactac
ttcttcagagttaccagaaagagaggacagccagtggaatcactttcctcactagaaacc
caacggagaatcatgaaaacatactga
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integrated database retrieval system
