Gambusia affinis (western mosquitofish): 122840617
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Entry
122840617 CDS
T07758
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122840617
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122840617
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
LRR_LRWD1
LRRNT
LRR_9
LRR_6
V-set
Motif
Other DBs
NCBI-GeneID:
122840617
NCBI-ProteinID:
XP_043989076
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All DBs
Position
LG12:complement(11434940..11473546)
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AA seq
622 aa
AA seq
DB search
MTDSPGPGGRALVPWPRVWKWVLASSLVSVVALTLPESSKACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETRVLDLSKNRLRWIQSGDLAPYPRLEEVDLSENLIATLEPNAFAALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDMRNLKQLEVGDNDLV
YMSHKAFSGLLGLEDLTIERCNLTSISGQTLSYLHSLVTLRLRHLSITALEDQNFRKLSN
LRGLDIDHWPYLEYISPLSFQGLDLHWLFITNTNITTVPSNSFKNLMHLTHLNLSYNPIT
TLDPWAFKDLLRLKELIMVSTGLLTVEPHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFSDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFVCRADGDPTPAIIWISPQRRRITAKSSGRIIVLPSG
TLEIRYAQLTDSGTYICIATNAGGNDTYFATLTVRGQPLDSASAFFLNRSLYSGEYFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPTTGSSTGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactgactctcctggtcctggtggtcgtgccttagtgccatggccaagggtgtggaaa
tgggttctggcttcctcgctggtctctgtcgtagctttgactttgccagagagcagtaag
gcctgtcctccacgatgtgagtgttcagctcagttgaggtctgtgtcatgtcagcggcga
cggctcacaaacatcccagaaggcattccaactgagacacgggtcttggacctcagcaag
aaccggctccgttggatacagtcgggtgatctggcaccatacccccggctggaggaagtg
gaccttagtgaaaacctcatcgccacattagagccaaatgcctttgctgctcttcaaaat
cttaaagtcctaaagttaagggggaatcagctgaagttagtacccatgggggcatttgcc
aagctaggtaatctcaccagcctggatctaagtgagaataagatggtgattttattggac
tacaccttccaagatatgaggaatcttaaacagctggaagttggagacaatgatctggtt
tatatgtcccacaaggcattctctggacttctgggactagaagatctgaccatagagcgt
tgtaacctcacatccatctctggccagacgctgtcctacctccacagcctggtcactctt
cgccttcgacaccttagcattactgccctggaggatcaaaactttcgcaagttatctaat
ttgcggggcctggatatcgatcactggccataccttgagtatatctctccacttagtttt
cagggccttgatcttcactggctcttcatcaccaacaccaacatcaccactgtcccttct
aattcattcaagaacctgatgcatctcacccatctcaacttgtcctacaatcccatcacc
acattagacccttgggccttcaaggacttgctgaggctaaaggagctcatcatggtaagc
actgggttgctgacagtggagcctcatgcccttggaggtctcagacagattcgagtactc
aacttctcctccaacgacctgcagactctggaagaggggtccttccactctgttaacagt
ctggagaccctcagagtggacgggaatcccttgttgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccagtgtgtgcaggcccggtg
gaggtgcaaggagtcagcctcagcgccttctctgactctgccctcttcgatcactttaca
tgccagaaacctaagatccgcaaccgtaagatgcaacaggtggttgctcgggaaggccag
ccagtgagctttgtatgtcgagctgacggagatcctacacctgccatcatctggatctca
ccacagcgtagacgaatcacagcaaagagttcaggtcgcatcattgttctccctagtggt
actctggagatccgctatgctcagctcactgacagcgggacgtacatctgcattgctaca
aatgctggaggcaatgacacctactttgccactctcacagtaagaggccagccactagac
tctgcctccgccttctttcttaaccgctctctgtacagcggggagtacttcaacgacaca
aatctaaacagcacacgagttttcctcaagttcaccttggacctgaccaccattttggtc
tcaacagccatgggttgcatcacgtttctcggagttgttctcttctgcttcctgttgtta
tttgtgtggagccgtggacgtggccagcgcaggaacaacttcacagtggagtactcgttc
cggaaatctgaacccaccacaggaagttctacaggagggaccaggaagtttaacatgaaa
atgatatga
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