Gambusia affinis (western mosquitofish): 122840696
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Entry
122840696 CDS
T07758
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122840696 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122840696 (rorcb)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122840696 (rorcb)
Nuclear receptors [BR:
gaf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122840696 (rorcb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
122840696
NCBI-ProteinID:
XP_043989203
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Position
LG12:11148203..11166786
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AA seq
496 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSNGPSALSLPRE
DGGCGSGADDGEEGLSRSYSSGGSTSTLSDLDDIATLPDLFDLPLTPDEASEYCGLELLG
GGGGSTGNTSNSSSSSSASSSNQNSPQQTITDTADSCGSQLLLTHSLLGRRRSLLDQLPD
DCSVTDLEHITQSIVKSHLETCQYSAEDMKRFTWVHYTPEDTRVFQNKSAEWMWQQCAHH
ITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNSNNNTIFFNGKFA
SAQFFKALGCDDLVSAVFELGKGLSRLQLSDEEMALFSAAVLLSPDRPWLTEGQKVQKLQ
EKVYLALQHSLQKSGASEEKLDKMLSKLPIMKSICNLHVDKLEFFRLVHPETAYSFPPLY
REVFGSEMPLPDSTDS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactatggagtcattacctgtgagggctgcaagggcttcttccgtcgcagccagcagaac
aacgccatgtactcttgctcccgccagaggaactgtctgattgaccgaacgaaccgcaat
cgttgccagcactgccgtcttcagaagtgtctggctctgggcatgagccgagatgctgtg
aagtttggccgcatgtcaaagaagcagcgcgacagcctctacgccgaggtccaaaagcat
cagaagtctcaagagtgtgtgggctctaacggcccctcagctctgtctctacccagagag
gatggaggctgcggcagcggggcggacgacggcgaggagggcctgagtcgctcctacagc
agtggggggtccacatcgaccctcagcgacctggacgacatcgccacactgcccgacctt
tttgacctaccgctgacgcccgatgaggccagcgagtactgcggcctggagctgctggga
ggcggaggaggcagcaccggcaacacatctaactcctcatcctcgtcttccgcttcttcg
tccaatcagaactccccacagcagaccataacggacacggcagacagctgtgggagccaa
ctcctgctcacacactcgcttctgggacgcagacggtcacttttggaccagttgcctgat
gactgctcagtaacagacctcgagcatatcactcagagtattgtaaagtctcacttggaa
acatgccagtacagcgcagaggatatgaagagattcacctgggtacattacacacccgaa
gacaccagagttttccaaaacaagtcggccgagtggatgtggcagcagtgcgcacatcac
atcaccaatgccatccagtatgtggtggagtttgccaagcgcatagctggcttcatggac
ctgtgccagaatgatcagattattttgctgaaagcaggctgtctggaggtcctactcata
cgcatgtgtcgcgcctttaacagcaacaacaacaccatcttcttcaatggaaaatttgcc
tcggctcagttcttcaaagctctggggtgtgatgatctggtgagcgccgtttttgagctg
ggaaaaggtctcagccgtctgcagctttcagatgaggaaatggccctgtttagcgctgct
gttcttctgtcacctgatcgaccctggctgacagaaggtcagaaggttcagaagctccaa
gagaaagtctacctggctctgcagcacagtctacagaagagtggtgcttctgaggagaaa
ctggacaagatgctgtctaagctgcccataatgaagtccatctgtaatctccacgtcgat
aaactggagtttttccgcttggtccacccagagactgcctacagttttccacctctgtac
cgggaagtgttcggcagtgagatgcctctgccggactccaccgacagctag
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