Gambusia affinis (western mosquitofish): 122840723
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Entry
122840723 CDS
T07758
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122840723 (irx5a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122840723 (irx5a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
122840723
NCBI-ProteinID:
XP_043989255
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Position
LG02:complement(7229314..7234738)
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AA seq
452 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPNKPLDKGDSTDTEADHKLLNPGDIGCDRFKEESHGKET
DPLLSDSELKEQEERTTELLPDSAKPTTSSPPAVPRGNQAGATQDKPSDLSHPQNTVTSN
VTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSGETQQACPGLGQSAVLGTNASPSRSSPQ
CPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGPLHSNHGSVTTGSTAHFNGLNQTVLNRAE
ALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcctctttagccctgtactcttgc
cccgcgtacagcaccagcgtcatatcgggacccagaaccgaggagcttgggaggtcctct
tcgggatccgcgtttgcgccctatgccggatctaccgcgttcaccagcgcctctccgggc
tacaactcccacttaccttacagcgcggacgcggctgcggctgccactttcacctcatac
gtgagttctccctacgatcacacaacgggaatggctggttctattggataccacccttat
gcggcgcccctgggcacctacccttacggtgaccccgcataccgcaagaacgcaacgcgg
gacgccaccgccaccctgaaggcttggctcaacgagcaccgaaagaacccatatccaact
aaaggggagaagatcatgctggccatcatcaccaaaatgaccctcacacaggtgtccacc
tggttcgctaacgccaggaggaggctaaagaaggagaacaagatgacctggacccctcga
aaccggagcgaggacgaggaggaggacgagaacatcgacttggagaaaaatgacgacgac
gagccaaacaagcctcttgacaagggggactccacagacacggaggcagatcacaaacta
ctgaacccaggggacattggctgtgacagatttaaagaagagagccatggtaaagagacg
gatcccctcctgagcgactcggagttaaaagagcaggaggagcggactacggagctgctg
ccggattccgccaagccgaccacctcgtctccaccagcggtgccccgagggaaccaggcc
ggcgcgacgcaagacaaaccgtccgatttgagccacccgcagaatacggtgaccagcaac
gtgacctctgttattcactcgcccccttcagcccctaaacccaaactttggtctttggcg
gagatcgctacgtcttcagacaggtgtaagggaagcggtgagacgcagcaggcgtgcccc
ggcttgggtcagagcgcagtgctgggcaccaacgcctctccgtctcggtcctccccccag
tgcccgctccccaacagcacggtcctatccaggcctctgtactacacctcccctttctat
cccggctacacgaactatggtggcagctttggaccccttcacagtaaccacggctcggtg
accacgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagag
gccttggtaagggagagccagaaagtcagaggccaaacgcaggtagatctttgtaaagac
tccccttatgaactgaagaaaggtatgtcaaatatttaa
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