Gambusia affinis (western mosquitofish): 122840807 Help Entry 122840807         CDS       T07758                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf04382   Cornified envelope formation gaf04510   Focal adhesion gaf04512   ECM-receptor interaction gaf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gaf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122840807  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122840807   09142 Cell motility    04820 Cytoskeleton in muscle cells     122840807  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     122840807  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gaf04147]     122840807    00536 Glycosaminoglycan binding proteins [BR:gaf00536]     122840807 Exosome [BR:gaf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    122840807 Glycosaminoglycan binding proteins [BR:gaf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122840807 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  122840807 NCBI-ProteinID:  XP_043989422 LinkDB All DBs Position LG12:13173557..13197907 Genome browser AA seq 1653 aa AA seqDB search MRTRVIIVFLTFFAMISSFTEGKSCVCNGKSRCHCKGVKGNRGEKGFPGDPGPPGPTGHP GFSGQPGLTGPKGSTGFDGPIGSKGDRGPDGKEGFAGSHGLPGVPGLQGPLGPPGDPGCN GTDGDPGRPGIEGNPGIDGNPGPPGQPGPKGDTQTTGYSRPGPPGPRGEDGRPGRPGLSG EIGLQGDIGLRGPPGSPGNIGAPGSKGQEGAPGNRGPKGFRGPRGPPGPPGRTKDFFTST LLITDLKGDKGDAGDKGCKGEPGYPGSLYHTKGQKGDRGNPGPEGKQGKDGEPGNRGFRG RPGRRGEPGHPGPIGRRGEKGNMGPSGPPGNILSLESLKGHMGDPGPPGLPGFPGAQGVM GFPGPPGSPGYALGIYVPGERGFSGPKGHKGDPGAPGGIHVGPPGLDGDPGDPGPRGNQG KPGRFVNGTDCVIKSLPGIKGIKGLTGPTGNNGYTGETGERGENCYECQSPGLPGPAGPR GPPGLPGTNQGRGEKGDPGFPGPSGLPGPPGPIGPSGLPGQPGQKGEPSSYVSPGLKGDK GEPGLPGRPGPNGSPGSLGLPGRKGTRGPPGELSQHHEVGDPGFPGPPGPRGKEGPIGYP GPAGYGLPGPPGTKGDTGVPGLPGEPGIPGQKGESGHFHTQGPPGPRGFPGPPGFEGSPG VQGVPGVPGKPGNPGQKGERGSLILNGKPGPPGQKGDKGLPGSPGAPGWGLPGQSGPPGP PGAPGEKGDSGHGHPGRPGPPGPPGENGAAGPPGDPGIPGLPGRPGITGKYGPPGEKGRK GSVGPPGLPGTKASCMGLPGPIGLPGAKGHTGHRGANGLPGEKGDAGLPGFGSPGLQGSP GPSGLSVPGPPGTPGRKGSRGQDGWPGQQGQIGDRGPDGISGHGPDGNPGNKGQPGPRGD PGPDGARGRQGSQGMEGDPGDRGPPGLPCPTRIYTGPPGDPGEPGNPGLPGLTGEPGRPG PKGQRGRAGPQGDVGQRGPPGDPGVDGQGASEVRRGPDGLPGDPGHRGHPGLKGVKGDPG IPGRPGPDGVPGPTGSKGAAGEPSYVYGPPGPPGQKGEPGSRSDVLLKGQKGEPGIEGQV GVPGRPGAKGSTGPDGKNGSPGFPGPVGSDGPPGIKGHIGPIGRPGIPGPTGLTGEHGIK GSQGRDGIPGPPGQIGETGIIEGAQGRPGDPGPPGPPGDIGPPGLYGRGSPGPEGDRGIP GLLGLPGESGPPGREGTCIPGPKGDRGFPGNPGNQGYPGPPGPQGLVVSGFKGDRGEPGF AGRPGLGGPPGNPGPQGPHGPPGVFGFPGPRGDPGPPGRYGPPGDRGDPGYSPGPCGPRG HKGFPGRPGRKGEPGYVDRIYEPGPPGFPGPKGNQGLPGVIGPPGSLGPPGPPGVKGPRG VSPPGPPGFTGHKGDKGKTGFPGQVGGPGLPGRKGLRGLPGRAATHYTDGFVIARHSQSI NVPDCPHGTSLIYSGYSLLFINGNERAHGQDLGTVGSCLPRFSTMPFLFCDTESTCRYAS RNDYSYWLSTDKLMPANMVAVTADKVAPYISRCSVCETTSKILAFHSQNTLIPECPRGWE TLWTGYSFIMQTGAGAEGSSQPLMSPGSCMEHFRRVPFIECHGRGTCNYYPDSFSYWLAS LDRNNMFRKPVPQTVKGFSLERVISRCRVCRKF NT seq 4962 nt NT seq  +upstreamnt  +downstreamnt atgagaacacgagtgatcatagttttcctgactttctttgcaatgatctcgtcgttcact gaaggaaaaagttgtgtatgcaatggaaaatcaagatgccactgtaaaggagtaaaaggt aacaggggagagaaaggttttccaggagatccgggtcctccaggaccgacggggcaccca ggattctcaggtcaacctggactaacaggaccaaagggcagtactgggtttgatgggcca ataggatcaaaaggcgatcggggaccagacggcaaggagggatttgccggatctcatggc ttaccaggtgttccaggtttacaggggcctctggggcccccaggtgatccaggttgcaat ggaacagatggagaccctggacgtccaggtattgaaggaaaccctggtattgatggaaat ccaggacctccaggtcagcctggtcctaagggtgacacacagacaacaggttactcaagg ccagggccaccaggaccacggggagaagatggaagaccgggtcgtccaggtttatcaggt gagataggactacaaggggacattggactaaggggtcctcctgggtctcctggtaatatt ggagctcctggctccaagggccaggaaggagctccaggaaatcgaggaccaaagggtttc cgtggcccccgaggcccaccggggcctccaggcaggactaaagacttttttaccagcacc ctgttaataacggatttaaaaggagacaaaggcgatgcaggagacaaaggatgcaaaggc gaacctggatatccagggagcctctaccacacaaaagggcaaaagggagacagaggaaac ccaggtccagaaggaaagcaaggaaaggacggtgaacctggaaatcgtggattcagggga agaccggggcgcagaggagagccaggacatccaggcccaataggaagaaggggtgaaaag ggaaacatgggtccatctggtccacctggaaacatactttcgctcgaatcactcaaggga cacatgggagaccctggacctccaggtcttcctgggttccctggggcccaaggtgttatg gggtttccagggccccctggatctccaggttatgcgcttgggatttatgtaccaggtgaa cgtggtttctcaggtccaaaaggacataaaggagaccctggggcccctgggggtattcac gtggggcctcctgggctagatggtgatcctggtgatccagggcctcggggaaaccaaggc aaacctggacgctttgtaaatggaactgactgtgtcattaagagtctccctggaatcaag ggaattaaaggtttaacaggacctacagggaataatgggtatactggagagacaggagag agaggggagaactgttatgagtgtcaaagtcctggacttccaggaccagcaggtccccga ggtccacctggccttcctggcactaatcaaggacggggtgaaaagggggatcccggcttt ccaggtccttcaggtttacctgggcctccagggcctataggtccatcaggattaccaggc cagccggggcaaaagggagagccatctagttatgtctctcctgggttgaagggagacaaa ggagaaccaggactccctggaagacctggtccaaatggttctcctggatctctgggttta ccaggaaggaaaggcactagagggccacctggagaattgtcccaacaccatgaagtagga gaccctgggtttcctggtccaccaggacctcgagggaaagaaggacccattgggtaccct ggaccagcaggttatggacttcctggcccaccagggaccaaaggagacaccggtgtaccc ggcctgccaggagaacctggaattccaggccaaaaaggggaatctggtcattttcatacc caaggccctccagggccacgaggatttccaggaccgcctggctttgaaggaagtccaggt gttcaaggagtacccggtgtccctggaaaaccaggcaatccaggacaaaaaggagaaaga gggagcttgatacttaatggaaagccaggacccccagggcagaaaggtgataaggggctg cctggctctccaggtgctccaggctggggtttacctgggcagtccggtcctccaggccct cctggtgccccaggagaaaagggtgacagtggccatggacaccctggtcgtccaggtcct ccgggaccacctggtgaaaatggagctgcagggcctcctggcgatcctggaatccctggt cttccaggacgtcctggaataactggcaaatatgggcctccaggagagaaaggaagaaaa ggttctgttggcccaccagggcttcctggaaccaaagcttcatgtatgggtttacctgga ccaataggacttccaggagcgaaaggacatacaggacatagaggggctaatggcttgcct ggagagaaaggtgatgcgggtttacctggatttggttctcctggccttcaaggcagtcct ggaccctctggattgtcagttccgggtccacctgggactccggggcggaagggatctcgg ggtcaagatggctggcctggtcaacaaggacaaataggagaccgtgggcctgatggtata tctggacatggtccagatggaaacccagggaataaaggacaacctggaccaagaggggac ccgggcccagacggagcaagaggccgacaaggatcccaaggcatggagggagatccaggt gatagaggccctccaggacttccttgtccgacacgcatctacactgggccaccaggagat cctggagaaccaggaaatcctggtttacctggtctcaccggtgagcctggaagacctgga ccaaagggacagagaggaagagctggaccacaaggggacgtggggcagagaggtcctcct ggagaccctggtgttgatggtcaaggggcatctgaagttaggcgaggaccagatggactc ccaggagatcctggacataggggtcatcctgggctcaaaggagtgaagggagatcctgga attcctggaaggccaggaccagatggtgttccaggtccaacaggcagcaagggagctgct ggagaaccaagctatgtgtacggaccacctggaccacctggacaaaagggtgaaccaggg tccaggagtgatgtcctcctcaagggacagaaaggagaacctgggattgaaggacaagta ggtgttccaggacgccctggagcaaaggggagcacaggacctgatggaaaaaatggttcc ccaggatttccaggtccagttggttctgatggtcctcctggaataaaaggacacatcgga cctattggacgaccaggtattccaggcccaacaggccttactggggagcatggtataaaa ggaagccagggacgggatggtattcctgggccaccgggtcaaataggggagactggtata atagaaggagcacaaggaagacccggtgatccaggcccaccaggtcctcctggggatatc ggtccacctggtttgtatggcagagggagtccgggaccagaaggggacaggggaatccca ggcctacttggacttcctggtgaatcaggaccaccaggaagagaagggacttgtattcca ggacctaaaggtgatcgtggattccctggtaacccaggaaaccaaggctaccctggtcca ccaggccctcaaggtctcgtagtatcagggttcaaaggagacagaggagagccagggttc gcaggaagaccaggtttaggtgggcccccaggaaatccaggccctcaaggaccacatggt ccacctggtgtatttggattcccaggaccaagaggagaccctggtcccccagggagatat ggcccccctggtgacagaggagaccctggatacagcccaggtccatgtggtccacgtggg cacaaaggttttcctggacgcccaggtcgcaaaggtgaaccaggctatgttgacagaata tatgaaccaggacctcctggatttcctggtcctaaaggcaatcaaggacttccaggagtg attgggccaccaggatcactaggaccgccaggaccgcctggcgtcaaaggaccacgcgga gtgagcccccctggtcctcctggattcactggccacaaaggagacaagggaaaaaccgga ttcccaggtcaagtaggcggaccaggacttcctggtcgaaaaggattaagaggtttgcct gggagagcagctacacattacacagatggttttgtgattgccaggcacagtcagagcatt aatgtccctgactgccctcatggcaccagtctcatctactctggttattccctcctcttc atcaatggaaacgagagagctcatggccaggaccttggcacagtgggaagctgcctccct cgtttctccaccatgcccttcctgttctgcgatacagaaagtacctgccgctatgcttcc cgtaatgactattcctactggctgtccactgataagctcatgcctgccaacatggttgcc gtcacagctgataaagttgccccctacatcagcaggtgctcagtttgtgaaacaacctcc aaaatcctagctttccatagccagaacactctgatacctgaatgtcccagaggttgggag accctgtggactggttactcatttataatgcaaaccggagcaggagcagaaggatcctcc caacctctgatgtctcctgggtcatgtatggaacatttccgccgagtgccttttattgag tgtcacggcagaggcacctgtaattactatcctgactccttcagctactggctagcctcc cttgaccgaaacaacatgtttagaaaaccggttccccagactgtgaaaggattttctcta gagagagtcatcagtcgttgtcgggtctgcagaaaattctga

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