Gambusia affinis (western mosquitofish): 122840921
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Entry
122840921 CDS
T07758
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04148
Efferocytosis
gaf04218
Cellular senescence
gaf04310
Wnt signaling pathway
gaf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122840921 (nfatc4)
04020 Calcium signaling pathway
122840921 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122840921 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
122840921 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122840921 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122840921 (nfatc4)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
122840921 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
122840921
NCBI-ProteinID:
XP_043989651
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Position
LG12:23148263..23173563
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AA seq
890 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPQRQIQGPSPARTAEPESSVGGEEEGDGALLRLDSS
NLGTDNHLAIAHAGHSINIPSPPPSSNQRAGMHSPPPRRATVREFSGTYESLPARSVQVS
ESCVVECPSIQITTISPEDEPAPPVPSYWEMGSGGGWDRERLYLPLLDPFSYRDRFPGSL
SPSPASSPSSRGWLSPASSCDSLLVEEEELNEANVGFGLSPSSRPTSPGGKKRRNSPLAS
PCISRRSSYSEDLQGCNLEGGESASQSQALPGSCELNIPQKTRKTSLEQLSPREVDQEPG
LGRSSPCPLPETQQPRREPPSLGMDYLPVPPALAWGRTRASAHSPLFRSNALPPLDWPLP
SQFDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPVVKLCGYAERKPLSLQVFVGT
ADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKLR
NSDIELRKGETDVGRKNTRVRLVFRTHLPVAPPVGPPGRVLALQVASLPIECSQRSAQEL
PVIESVSVTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNECL
LCVRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSAPPLDG
GTVGPPRMDRGFHVSDDRGLGFHLPPYSSTYSPSCLPMTYQEEYCPKPDSAVEEPGGSRA
PLSERNPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFP
TESPLANSPLPPIPTSPFPQYSTYPQELCPSPPSNPYQDACPAPYSHYEGWEPQGRMLGT
SHGGEEDAKNQECPLEFNSSASMHHITFEEVSEFIGEDIQAYQSGSHMNN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagctggtgttt
gaggaggacccgcctcagcggcagatccaggggccgtccccggcgcgcacagccgagccg
gagagctccgtcggcggggaagaggaaggtgatggcgccctgttgcggctggactccagc
aacctcggtacggacaaccacttagccatcgctcatgcaggacactcaatcaacatcccc
agcccgccgccctcgtccaatcagagggcagggatgcattcgccacctccccgacgggcc
accgtcagagagttcagcggcacctatgagagcctgccggcccgctccgttcaggtgtcg
gagtcctgtgtggttgagtgccccagcattcagataaccaccatttccccggaggatgaa
ccggcgccgcccgtccccagctactgggaaatgggcagcggcggcggctgggacagggag
cgcctctacctccccctgctggaccctttctcctaccgcgaccggttccccggctccctc
agccccagccccgcctccagcccgtcgtcccgcggctggctcagcccggcgtccagctgc
gactccctgctggtggaggaagaggagctcaatgaggccaatgtcggtttcggactctcc
ccgtcctccaggcccacttccccaggaggaaagaagcgcaggaactctcctctggcgtct
ccctgcatctcgcggaggagcagctactcggaggacctgcagggatgcaacctggagggc
ggagagtccgcctcgcagtcgcaggcgctgcccggcagctgtgagctcaacatcccgcag
aaaaccaggaagacgtccctggagcagttgtctcccagagaagtggaccaggagccgggt
ctgggccgaagctccccctgtccgctgccggagacccagcagcccaggagagagcccccg
tctctgggaatggactacctccctgtgccccctgccctggcctggggcagaaccagagcc
agcgcccacagtcctctcttcaggtctaatgctttgcctccacttgactggccgctcccg
tcccagtttgaccagtatgagctgcgcatcgaggtgcaaccccggccgcaccatcgagcc
cactacgagacggagggcagcagaggcgccgtcaaagccgctcccacaggacatcctgtt
gtcaagctgtgcggctacgcagagaggaagccgctgtcgctgcaggtttttgtcggaacg
gctgacgaccgttcaatcaggcctcatcctttctaccagatacacagggtgaccgggaag
atggtcggcaccgccagccatgaaagcgtccaggcagggaccaaactgttggacatcccc
ctcaaccccgagaacaacatgaccgcgctcatcgactgcgctgggattctgaaactgaga
aactcagacatcgagctgcgaaaaggcgaaacggacgtcgggaggaaaaacactcgcgtg
cgtctggtgtttcgtactcacctccctgtagcgccccctgtgggccctcctgggcgcgtc
ctggctctgcaggtcgcctctttgcccattgaatgctctcagcggtcggcccaggagctt
cctgtcatcgagtcagtcagcgtcacgtcctgctctgtggagggaggcgaggagctgctg
ctgagcggtaccaacttcctgccgatctccagagtcctcttcatggagagaggcaccgat
gggaaactacagtgggaggaggaggcgcatgtggaccgggacaacagcaacgagtgtttg
ctgtgtgtgagggttcctgcctacagtgacctctctgtcagtcggcctgtgtccgtcagt
ctgtacgtctccaacgggaagaggaagcggagcagcacgcactgcttcaagtaccttcct
gttatgtttaaagaagaggatcctttgctgtcccgtccctctgctccccctctggacggg
ggaactgtgggtccgcccagaatggacagaggcttccacgtgtccgacgaccgcggcctc
ggcttccaccttcccccctactcctccacctactccccttcctgcctgcccatgacctac
caagaggagtactgccccaaacccgacagcgccgtggaggagccaggcgggtccagggcg
ccactgtccgagcgtaatcccagctttgagaacctggagctgggcttcactgaactgctc
ccccctctgtatccccgcggccctcagcctccgtccccgtctccttccccatggctggac
tccccctacctgtcctcttcaccttctccgtcccactcttcctctctcagcccgttcccc
actgaaagccccctagccaactccccgctgcccccaattcccacctcgcctttcccgcag
tactccacctatcctcaggagctgtgtccctcgcctccgtccaacccttaccaggacgcc
tgtccggcgccgtactcccactacgagggctgggaacctcagggaaggatgctgggtacg
agtcacgggggagaggaagacgccaagaaccaggagtgtccactggagtttaacagctcg
gcctctatgcaccacattaccttcgaagaagtgtcagagttcatcggggaggacatccag
gcctaccagtcaggctcgcacatgaacaactag
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