Gambusia affinis (western mosquitofish): 122840924 Help Entry 122840924         CDS       T07758                                  Symbol copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism gaf  Gambusia affinis (western mosquitofish) Brite KEGG Orthology (KO) [BR:gaf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gaf04131]     122840924 (copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gaf04147]     122840924 (copa) Membrane trafficking [BR:gaf04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     122840924 (copa) Exosome [BR:gaf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    122840924 (copa)   Exosomal proteins of bladder cancer cells    122840924 (copa) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  122840924 NCBI-ProteinID:  XP_043989655 LinkDB All DBs Position LG12:23199617..23216417 Genome browser AA seq 1222 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADAVTLFDVQQK RSLATVKIAKVKYVVWSSDTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAVQMAADLDMEAA GGEGWGDDAELTMDEDGYIDAQDGLGDEGLGKEEGGGWDIDEEVELPPELDVPLGAGGST EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSLETSMRLLHDQVGVVNFAPYKSLFMQT LSRGRTAYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTAGRF EEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYMVGLTMEVERKKLPKETLDQQK RICEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR KILAACEKTLTDTHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQICR VTQVTEIGKDVIGLRVSPLQFR NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt atgctaacaaaatttgaaaccaagtctgcgcgtgtgaaaggtctgagttttcatccaaaa agaccatgggttcttgcaagtttgcacaatggtgtcatccagctgtgggactatcggatg tgcacactgatcgataaatttgatgaacacgatggtcctgtcagaggaattgatttccac aagcagcagcctctttttgtgtctggaggagatgactacaaaatcaaggtgtggaactac aagctgagacgctgcctctttacccttttgggacacctggactacatcagaactacgttc tttcaccatgaatatccatggattctgagcgcttcagatgatcagaccatccgcatctgg aactggcagtcgaggacctgtgtatgcgtcctgacgggacacaaccactacgtgatgtgc gcccagttccacccatcagaagacttggtggtgtccgccagtctggaccagacagtgcga gtgtgggatatctccggtttgaggaagaagaacctgtctccgggcgccgtggagacggac gtgcgcggcatcaccggggttgacttgtttggtgcctctgatgcagttgtgaagcacgtc ctggagggacacgaccgtggggtcaactgggctgctttccaccccaccatgccgctcatc gtgtctggagccgacgacaggcaggtcaagatctggagaatgaacgagtccaaggcgtgg gaactcgatacgtgccgcggccactataacaacgtttcctgcgccgtcttccatccgcgc caggagctcatcctctccaactcggaggacaagagcatccgggtgtgggacatgtccaag cggaccggagttcagacctttcgccgtgatcacgatcgcttctgggtgctgggagcccac ccaaaccttaacctgtttgcagctggtcatgacagcggtatgatcgtcttcaagctggaa cgggaacgtcctgcttacgctgtgcatggcaacatgctgtactacgtcaaagatcgcttc ctccgccagctggacttcaacagcagcaaggacactgccgtcatgcagctccgcagtggt tctaagttcccggtgttcagcatgtcgtataatcctgctgagaacgccgtcctgctctgt acaagagcgaccaacctggagaacagtacatatgacctctactcaattcccaaagaaagt gactcccagaaccccgatgcaccagagggcaaacgatcatctgggctgactgcggtgtgg gtggcaagaaaccgatttgcagtccttgatcggatgcactctcttctgattaaaaacctg aaaaatgaaatagtgaagaaggtccaggtgccaagctgcgaggaaatcttctacgcagga accggctcgctgctgctgcgcgacgccgacgccgtcacgctgttcgacgtgcagcagaaa cgctctctggccacggtcaaaatcgcaaaggtcaagtatgtggtgtggagctccgacact tcccacgtggctctgctggcaaaacatgctattatgatctgcaaccgtaagctggaaagt ctctgcaacattcatgagaacatcagagtgaagagtggagcctgggacgagagcggcgtc tttatttataccacctccaaccacatcaaatacgccctcacttcaggtgatcatggcatc atccggaccctggacctgcccatctatgtgacccgggtcagaggcaacagtgtttactgt ctggacagggagtgcaggcctcgcgttctcaccatcgacccgactgagtaccgcttcaag ttggctctggtcaaccggaaatatgatgaggtgctccacatggtgcgaaacgccaaactg gtgggtcagtcgatcattgcctaccttcagaaaaagggctaccctgaggtggcgctccac ttcgtgaaagacgagaagactcgtttcagccttgctctggaatgcggaaacattgaggtg gcactggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggcgaggcg gcgctgctgcagggacaccaccaggttgttgagatgtgctaccagaggaccaagaacttc gacaagctcaccttcctctacctcatcactggtaatctggccaagctgcgcaagatgatg aagattgccgagatcaggaaggacatgagcggtcactaccaggcggctctgtatctgggg gacgtcagtgagagagtccgaatcctgaagaactgcggacagaagtctctggcttacctc actgcagccactcatgggctggatgaagaggctgaggcactgaaggagacctttgaccca gaaaaggagacggtgccagaggtcgaccctaatgcacagctgctgcagccgccgcctccc atcaaccccctggacaccaactggcccctgctcaccgtatccaagggcttctttgaggga gccattgcagcaaagggtaaagcagttcagatggctgcggatttggacatggaggcagct ggaggcgagggctggggagacgatgctgagctcaccatggatgaagatggctacattgat gcccaggatggattaggagatgagggattggggaaagaggaaggaggaggctgggatatc gacgaagaagtggaacttcctccagagctggacgttcctctgggagcaggagggtcaaca gaagatggattctttgtgccgccaaccaagggcatgagtccaacccaaatgtggtgcaac aactcacagctgccagtcgaccacatcctggctggatccttagaaacatctatgagactg ctccacgaccaggttggagttgtgaactttgccccctacaagtcgctgttcatgcagact ctgtctagaggccgaaccgcttacctggggctgccgtctctaccttgtctgcgcggtcac cctcagaggaactggaaggactgtggggcgaagcagggactgcctgctgtggggctgcgc ctctccgacctgatctctcgcctccagcagtgctaccagctgaccacggctgggaggttt gaggaagctgtcgagcgcttcagagccatcttgctttctgttcctctgctggtggtcgat aacaagcaggagatcgcagaggctcagcagctcatcacgatatgcagagagtacatggtg ggtctcaccatggaggtcgagaggaagaaattgcctaaagaaactttggatcaacagaag aggatttgtgagatggctgcatatttcacccactgcaacctgcagccggtccacatggtt ctggtgctgcgcacagccctgaatctcttctttaaactccgcaactttaaaacagccgca ggatttgcgcggcgcctcctggagctcggcccgaagccagatgttgcacagcagacccgt aaaatcctggcggcttgtgagaagaccctgaccgacacccaccagctgaactacgacccc cacaatccgtttgatctgtgtgctgcctcctttgttcctctctaccgtgggcgtcccgtt gagaagtgtcccctctctggagcctgttactgccctccatacaaaggccagatctgcagg gtcactcaggtgactgagattggcaaggatgtgatcggtctgcgtgtgagcccactccag ttccgctaa

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