Gambusia affinis (western mosquitofish): 122841101
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Entry
122841101 CDS
T07758
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122841101 (chd7)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122841101 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
122841101
NCBI-ProteinID:
XP_043990055
LinkDB
All DBs
Position
LG12:9774662..9874983
Genome browser
AA seq
3282 aa
AA seq
DB search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NT seq
9849 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcctctttggtgacgatgcagggttgttctcggacgaa
ttggatagtttgggagactgcttcccccagcagtcagcggctggcccagccaacccactc
gccccaccctcaaacccatctctgaaccacgagcaccagggaaccagagcttaccaccaa
ggaatgcttcatggcactggggccggaccggggcagtccaaactggggcaaatgtatgag
cacagcccgtatacaggctatgatcaagcgggtgcccctggaggacggatgatggctcag
aatggtcccagccagggctcgccgaatgtgaacacagccatgaacggcatgacctcccac
taccacaacaacccagctaactctagtaacactcaccacgggtaccagggcgatgctggg
gcagcaggagggggtgggggcggagtttggggcccacagcagcagagcagatctgtgtat
cagcaggcttcagcaccatcaggggctggtcccaaccagatgggaagctaccaaatgtct
caaggcaactacgctggcatgcaaggtcctcctacatccggtgcagcgcgcatgaatcaa
cactatccttcacagagcatggcccctgttccagctcaggacccatctcactacttagga
catgttgggatggggggggtccagatgagacagcctcagccacagccccagaactatccc
aacatgggccacacacctcgatacccacactccccttctagacaacctccacaccagcac
caacagggcatggcaccgttcgggggtgctcagtaccctggctatcaaccccagtatgct
gccatggggcctgggatgggccaggcggctaatgctaatgtcagcgctaacaccagccag
tccatgggagcagggcagctgggccagaggttcagccagggagtgagctcagcaccgggt
caacagggacaacgatacccctctgttccaccccaccagccccactctgcctcaatgcag
cagcaggcagggcagcaaggccagcctatgcatcccctaaaccaccccccgaatcttccc
caacctccaaaccaaccccagtcccaccttactgccccagctcagggatcttacccctcc
ccgtcgtctatgtccccaatgcgggttctgggaaccccgactcctcctcccccgcaagga
agaccccccagcgcaggactagccgggcctccggatgtcgcaggatacacagcaatgcat
tctccgcccagtgctatggcccatgcacagagaactccccagacctctctatctgcagca
cacccacaacaccagcagccccacaacatgcctcccagtgcagggcaaatttatcctggc
atggggcctcagcgtggaccacaaatcgggccgactcggctccagcaaccacaagggcct
cacgaagcctcagtcagccagggggtggaccagcgcctgctccaggcccagcagcaggcc
tctcgaggtgggcagcccatgccgtctgctcctatggggttccagggtccgcctattggt
caacacggagcccctgcccctaaccagggcttagctccacctgcccagaacactcagacg
cagcacacgcatctgcccccacacccccaccacctgcaaagcacgccccctcctcccagc
caggcctcccacccatgggcacctcagccatctgccccccacccactctcctcaccccct
cttaccccacagaaagtgcctcacatacagcattccccctcagacctgtcaagtgatgcc
tcaatgatggttaccgacaggccaacggttggtgccggagcccccagccagcctatcagc
acagagaagcctactgatcaggagaccaagccaaaaaagaagaagaaaaagaaagctaaa
gcagtggaagaaaaagaagatggaggcaagaaagaagtgagagaaggaggagatgaagac
gtaaagtctgagtttcctgcagcaggaagcaatgcaagtgaacagcttattggcacagga
gctgttgaagggagtttgccgccaccggagaagaagaagcggaaaaagaaaccaaaggag
aagacggagggcaaggagcccaaagagcccaagaccccgaagacccccaaaacacctaag
actcccaaagagcccaaggagcccaaggagaagaaagccaagagcaccacacccaaggcc
aagactcccaagaaaaccagcagtaaaaaggtggaatcagagggtggggccagcgctgct
aagaaggacgccaagaggaagagagagtcgtcagtcggtgacgatgtggaggtgaagtct
ccactgccctctcctcctgaagaggaggatgatgatggcgtgcagaagcgccgttcgagt
cggcaggtgaagaggaagaggtacacagaggacctggagttcaggatctctgaggacgat
gacagcggagacgattcaccaacaccaaaatctccttcatcctcctcacagcaacaggat
ctgactgaggctgaagggcctgttgtggagaagatcatgggtatgcgcagcgccaagaag
caactggagtcgggcgaggaagtggaggtggaggagttctacgtcaagttcaagggcttt
tcttacctgcactgtcgctggtcggaactggaggagctggagaaggacaagagaatccat
cagaagataaagaggtttaaagccaagcagcaactcaacaacttcatcactgagatggac
gatgagccttttaacccggactatgtggaggtggaccgagtccttgatgtttcagagagc
acagatgaaaatggagagatcgtcaccttatatttggtgaaatggtgcagtttgccttat
gaagacgccacctgggagctgaaggcagacatcgaccagtctaagatagacgaatacgaa
cgcatcgcagcgcgcgaacccaacactaaccgagtggatcggccttctgcagccgactgg
aaaaagctggagagctccagagaatacaggaatggcaacgcactcagggaataccagctc
gaaggcctcaactggctgactttcaactggtacaactcacgtaactgtatcctggcagac
gagatggggctcgggaagaccatccagtccattacattcctctatgagatatacatgaag
agcattgaggggccattcctgatcatcgcccctctctccaccatccctaactgggagaga
gagttcaggacctggacggagctcaatgtggtggtctaccatggcagccaggccagccgg
aaaaccatccaggcctatgagatgtactacagagacgcacagggtaagataataaaaggc
gtgtatcggttccatgctgtcatcacaacattcgagatgatccttgccgactgtccggag
ctgcgcagcatcccgtggcgctgcgtggtgatcgacgaagcccaccgcctcaaaaaccga
aactgcaagctgctggaggggctcaaaatgatggatatggagcacaaagtcctgttgaca
ggaactcctcttcagaacacagtggaggagctcttcagcttacttaacttcctggaacca
gagagattcccgtctgaacagacttttatgactgaatttggagacttgaagactgaagaa
caggtccaaaaacttcaaggtattttgaagcccatgatgcttagaagactgaaggaggat
gtggagaagaacctggcccccaaagaagaaaccattatagaggtggagttgaccaacatc
cagaagaaatactatcgggccattctggagaaaaacttctccttcctgtccaaaggaggc
gcaggaggaagtggatcagctagtgtgcccaacctcctcaacaccatgatggagctgagg
aaatgctgcaaccacccctacctcataaatggagcggaggagaagatcatcgaggagttc
agggattcccacggcggcaggattgatgtgcctgaaatggccctccaagctatgatccag
gcagctgggaagctggtgctcatcgacaagctgctgcccaaactaaaagccggaggacac
agggtgttgattttcagtcagatggtccgctgcctggacattctggaggactacctcatc
cagagacgctatccatatgaacggatagacggccgcgttcgggggaacctgcgacaggcc
gccatcgacaggttttccagaccagattcggaccgatttgtcttcctgctctgtaccaga
gccggtgggcttggcatcaacttaaccgcagcggatacatgcattatcttcgactctgac
tggaaccctcagaatgaccttcaggctcaggcgagatgtcatcgtatcggccagtccaag
tcggtgaagatctaccgcctgatcaccaggaacagctacgagcgggagatgtttgacaag
gccagtctgaagctcgggctcgacaaggccgtcctccagagcatgagtggccgagagaac
gccaacagcggggtccagcagttgtctaagaaagagattgaagacctactgagaaaaggc
gcctatggcgctttgatggacgaagaagacgaaggctcgaaattctgcgaggaagacatt
gaccagatcctccagagacgaacccacaccatcactatcgagtcggaggggaaaggctcc
acgtttgctaaggccagttttgttgcaacaggaaaccgaacagacatttctctggaggat
ccagacttctggcagaaatgggccaagaaagcagagctggacatggatgccatcaacggc
cagaacactctggtgatcgacacgcccagggtgaggaagcagacgcggcactacagcagc
gtgaaagaggacgaaatgctcgagttctccgagctggagagcgacgacgacgaacccagc
aagccgtctgccaaacaacgacggcctcaagacaaaacccagggatacccccggtccgag
tgcttcagggtggagaagaacctgctcgtctacggttggggtaggtggagtgacatcctc
gctcacggccgcttcaagcgtcccctgaaggaggcggatgtggagacgatctgcagggct
ctcctggcctactgtctgctgcattaccgtggcgacgagaacatcaagagcttcatctgg
gacctgatcactccaagtgaagatggcaccaccaggacgctgacgaatcactctggtctc
tctacccccgttcccaggggcaggaaggggaagaagggcaagatgactgctcctcctcct
cagacaccacgagctgattggctggccacctgcaaccctgaccatttactgcaggaggac
agctacaagaggcacttgaaacatcactgtaacaaggttctgctgagagtccggatgttg
tattatctgcgacaggaagtcatcggtgaccaggctgagcgtattctggagggagccgac
tccagcgtgttggatatctggatccctcagccgttccacgctgaggtcccagctgactgg
tgggacacagaggctgacaagtccctgctcatcggcgtcttcaaacatggctatgagaag
tacaactccatgcgtgccgaccctgccctgtgcttcttggagcgagtgggcatgccagac
gccaaagcgatcgccgctgaacagaggggctccgacatgatggcagatggcattgagggt
gaggatgaggatccagagtataaaccgatacgtatgccatttaaagacgacctggacgat
ttcaccaactctcccctggatgacaaagatgatgcagttgaaggcgagactgaagttaag
tcaggtgaaaatggccagaacgtaccgtcagtgggcggagcttctggctccagcgagcga
ctgtattggccagcggcctcggccctgacggccaggcttcgccgtctgatcacggcctac
cagcgctccaaccgcagagagcagctccgtcaggaggcactcaacagacccgacggtcgc
cgacgacgacgcagggagttcctgccttccatccccatggttcctgaaacgggaggcgct
accacgtacatccaggatggcacgggggtgttcatgacagaaggaagcccatatttggct
aaaggaagcgcttattttgccaaaggtggtcagtttctgccagaggcttcgccagtgatg
acggccaactccctgatgtctgatggatccctgtattatagagagaggagacaaaggtgg
acgcgtcgtgaggaggcagacttctaccgtgttgtgtccacctttggagtcgtgtttgat
acgcagcgtcaaaagtttgattggacccagttccgagcgtttgcccggctggacaaaaaa
acagatgagagtttggagaaatattactactcattcattgccatgtgcaaacgggtgtgc
aggatgcaggtcaagaccgagacagaactcccagacccgactctgatcatcgacccgatc
accgaggagcgcgcctctcgcaccctgtaccgcatcgagctgctgcgccgcatccgagag
caggtcctccctcacccgctgctgtccgagcgcctcaagctctgccagccgtctccggac
ctgcccgagtggtgggagtgcgggcgccacgaccgtgacctcctcctgggggcctcgaag
cacggcgtcagccgcacggattatcacatcctcaatgaccccgccttgggcttcctggag
gcccaccagcgcttcaccagtcagcgaggccctggcgccgtcagcatcggcgctcttgga
gaactcggcaaaatcgggatggggatggcagaagcggcctctgcgccacttctcactgct
gcagagctggagagtgccgcagccgctgccaaaatggccgtggacacagctaaagaggag
gaagaagggaaggctgtaaagatggaagaagagaaaacagaagtggaggtaaaaatggaa
acggaggaggaagattccagcaacattccatgtatgaagactgaaccccttgagcaaaag
ggaaaccaggacgatgctgatgaagggaaagaagaggcagcagcttcacccacgaaggtc
aaagccgaagacgttttgccaaaggttgagaaagacgatgatgaagtgaaaccagaaagc
cagacaacaaatgaccaagatcatgacatgtcagaagagaagagcagcacaagccctgaa
tgtcacctaggcaacgagaaagacgttggcgctgagctcccagaatcctctgctgaagca
caacttggccccaagactgcagaggaggaagatggcgaggagaaggaggcttctgaatgt
cttaaatctccaaagtctgccgaaaccgagaaaagcccagaggaagaggaggaggagagg
ctggatgaagatgacaaatcggagaagtcttctcaggctgaagcgagcgcaaggcagaag
aacttcgacgaggagagcatcgcttctctgagcacgtccgtacgggacgagacccgagac
gagttctgtcccgacgacctgcaggaaacgtctgcgctgcacaccctgcaggaccgtgcc
tacgccttctctttctggcctaaggaccgcgtgatgatcaacaggctggacaacatctgc
gaggctgtcctgaagggcaagtggcccgtcaacagacggcacgtcttcgacttccctggc
aacctcttgcccggtcacggctccgcggcaaccgcagccgccgtagccatggtgagcgag
agcccgctgcagaggcggagtctggccgagctgacgatggccggcatccacacgccgtac
agcgggagcgaagacaaaacactctctccgcaggttcatgacgacgctttgagcctgacg
gtgcctcgacagaggaggaggagaaggaaaaagattgagatcgaggcagagagagcggcg
aagaggcggaacctgatggagatggtggctcagctcagggaaagccacgccgccgcagag
tctcagaaccaggccatcgacctcactaagggcgtgcaccaccattacaaggcttctccg
tcattggccggcttccccagtgccttgatgacaaacccttccctcaaggcccagatggat
ttgctgcagcaagtcccgccttccggacacagagccaacggttcgttggacgccgacctg
cccatcacaaagaggaggcggggccgcaggaaaaatgtggagggcctggagctgctgttc
atgggcaacaagagagcagccggggatgatcccgatgggacaaaggttccaggagtggag
gcggtccaggaagcgccccagtcccacagaccgatcagcgtcccggagcagagccccaac
gcccgctctctggcctcaggcagcctggaggaggaggagacgcccgtctccagcaaagac
ctgggagagtggctgagacagcatcccacatacaccatggacatgactggattcacacca
aagagcgaggagttgctgttatctcagttctccaagcccaagcagaagcgccatcgctgt
cgaaaccccaacaagatcgacataaacacgttgaccggggacgagagagtgcctgtggtc
aacagacggaatggacgcaagatgggtggggccatggctccaccaatgaaggagctcccc
aggtggttattggagaacccggagttctccatcgctcctgattggacagacatcgtcaaa
cagtcgggtttcctcccagaagccatgtttgaccgccttttgaccggccctgttgtcaga
gaggaaggcgttcgtcgtcgagggaggcgacccaaatcggagatagtgaaggcagcggct
gccgctcaggccgcagcggcagcgcaggctgcccaggcgtcgctggcgtcagccgcttcc
tctgcagggggaatcaacccgctgctgctcagcagcctgttcggagggatggacctgtcg
tctctccagagccttcagtcgctccagttggctgctggtctgatggccttcccgccacct
gctgaccccaaacagtccgccgccaacgccgccgccgcctccatgctgcccctcatgata
cccggcatgggagggttgcccaacatggccgccgccattcccaacatgttcagccttgga
ggaatatttggaggtaacctggcggccgccgccgctgccaccgccgcttccaacgccgct
tctggaaacaccaacgggacgctggagggagacggaggcaacggggaggagacggcaaag
agggagaaggaggcgagagaagacggagacgagatgggagaggaagatgatgaagaggag
gaggcggagggagaggaggagggagcgaaaaagaccaagaagaggaagatggaggaagag
gttgaaaaaaatgagaaacctgtcggcgatgcgtccggcgctgccaagatggcagccgcc
gaggctccagcagaggtttccatcaacggggacacagccgccctgctggccgccgccggt
atgtcggccaactccctggcgttcaaccctttcctgctgtccaccatggcgcccagcctc
ctctacccctccatgttcctcccaccgggcctggccggcctcagcctgcccggcttcccc
accgcctccctcgccgagctgcagagcgccatggccggggcgatgggcgacagcgcctcc
accccgaacccgccgagagacgccgagggggagaagagggacgacaggaaggctgcggac
gacgaggaggaagaggaagaggaggagggagaggagacggactcggcggagcagaaagag
gaaggagcgacgggcggaggaatgccggaggagtctgcggcgtctccccagaacggaacg
agtgactga
DBGET
integrated database retrieval system
