Gambusia affinis (western mosquitofish): 122841256
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Entry
122841256 CDS
T07758
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122841256 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122841256 (exosc4)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122841256 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122841256 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122841256
NCBI-ProteinID:
XP_043990340
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All DBs
Position
LG12:complement(15985095..15988595)
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLETLIEAAMTACKCVSKVLDEVVRQHLQETS
VLSRE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttggagctgctctctgatcaaggataccgcctggatggaagaaaagccacc
gaactacggaaagttcaggcccgtatgggagtgtttgcccaggctgacgggtctgcttat
ttagagcaaggaaacaccaaggctctggctgtggtctacggtccgcacgagatgcggggc
tccagaagtcgggctcttcacgatcgagctgttatcaattgccagtacagcatggccacg
ttcagcacagctgagaggaagaggagaccacatggagatcgcaaatccaccgagatgagt
ctccacctgaagcagacgtttgaagctgctgtaatgacccagctcttcccacgctctcag
atagacatctatgtgaagattctacagtcagatggagggaactacagtgtatgtgtgaat
gcagctacattggcagtcattgatgcaggcatccccatgagagactacgtctgcgcctgc
accgtaggttttgtcgatgagactccccttgccgacctttgctatgctgaggagagcgga
ggagtgagttctctggctttggcgctgctgccccgaggtggacagattgctcttgttcag
atggatgctcgacttcatcaggaccacctggaaactctgattgaagctgcaatgactgct
tgtaaatgcgtgagcaaggtgttggatgaggtggtgaggcagcacctccaagaaacatcg
gtgctctccagagagtaa
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