Gambusia affinis (western mosquitofish): 122841316
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Entry
122841316 CDS
T07758
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122841316 (cxxc1a)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122841316 (cxxc1a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122841316 (cxxc1a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
122841316 (cxxc1a)
COMPASS/SET1 complex (yeast)
122841316 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Rhamnogal_lyase
Motif
Other DBs
NCBI-GeneID:
122841316
NCBI-ProteinID:
XP_043990531
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Position
LG01:41490529..41497832
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AA seq
575 aa
AA seq
DB search
METPSAPVYCVCRKPDINCFMIGCDSCTEWFHGQCVGVSEKAAKAIRVWFCPSCRDRDSS
LEIKYRQKKSKEAEPERDDRTDGERSSALQASIERRRGSQIKRSARMCGECDACLRTEDC
AQCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVRDEEMSRSGSRGRGLSAKGAGHL
SEDDEEEDEDEEGFSESELELYQQYKAAGYRDLVWHSEEEDDAQSDSLRKKAVKVKHVKR
RDKKPEKKKSVSVPKEEAKPRRHKVKQRHRERVRHSERAGEGGAKEAGGALRQCLGPGCV
EPARCGSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCVAEEMGRRQLERIRKEQQAAR
LRLTLMEKRFHELETIIANAKQQQVQQDEEVAEGDGDDTDLQIFCVSCSHPVNPKVALRH
MERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPAD
EVCGCPLVKDVFEPTGEFCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERN
LRTAMTNRAGLLALMLHQTIQHDPITTDLRSAKDR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcccagcgctccggtttactgcgtgtgtcggaagccagatatcaactgcttc
atgataggctgcgacagctgcacggagtggttccacggtcagtgcgtcggcgtgtcggaa
aaagcagccaaagccatccgagtttggttctgcccgtcctgtagagacagagactcatct
ctggagatcaaataccgtcagaaaaagagcaaggaggcggagcctgagagggacgacaga
acggatggcgagcgaagctccgccctccaggccagcatcgagcggcgacggggttctcag
atcaagcgttcggcccggatgtgtggcgaatgcgacgcctgcctgaggacggaggactgc
gctcaatgcgacttctgcaaagatatgaagaagttcggtggtccaaacaagatccggcag
aaatgccgcctccggcagtgcgaagtccgagctcggaagatgcttcgagttcgagacgag
gagatgagtcgaagtggcagcagggggcggggcctgtccgcaaagggggcggggcatctt
tcagaagatgatgaagaagaagacgaggatgaggaaggtttcagtgagagcgaactggaa
ctgtaccagcagtacaaagcagctggatacagagacctggtgtggcacagcgaggaggaa
gatgatgctcagtcagactctctgaggaagaaggcggtgaaggtgaaacacgtgaagaga
cgagacaagaaaccggagaaaaagaagtccgtttctgttcccaaagaggaggcgaaacct
cggcgccataaggtgaagcagcgccacagggaacgtgtgcggcacagtgagcgtgcagga
gagggtggggctaaagaggcgggcggggctttgaggcagtgtctgggtccgggctgtgtt
gaaccggcaagatgtggctccaagtactgctcagaggactgcggcatgaaactggcagcc
aaccgcatctatgagatcctcccccagaggatccagcagtggcagcagagtccctgtgtc
gccgaggagatggggcggagacagttggagcgaatcaggaaggagcagcaggccgccagg
ctccgccttacgctaatggagaaacgtttccatgaactggaaaccatcatcgccaacgcc
aagcagcagcaggtccaacaagatgaggaggttgctgagggagacggggacgacacagac
ctgcagatcttctgtgtgtcctgcagccaccccgtcaaccccaaggtggcgctgcgacac
atggagaggtgctatgctaagtacgagagccagacctcatttggctccatgtatccgact
cgcatcgaaggggccacccggctattctgtgacgtctacaaccctcagagcaagacatac
tgcaagcggctgcaggttctgtgtccagaacattccagagatcccaaggtcccggcagat
gaggtgtgcggatgtcctctagtcaaagacgtctttgagcccactggagagttctgccgg
gtctccaagaggaagtgcaacaagcactactgctgggagaagctgcggcgggccgaggtc
gacctggagcgagtccgagtgtggtacaagctggacgaattgtttgagcaggagaggaac
ctgaggacggcgatgaccaaccgggctgggctgctggcgctgatgctgcaccagaccatc
cagcatgacccaatcaccaccgacctgcgctctgccaaggacaggtag
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