Gambusia affinis (western mosquitofish): 122841397
Help
Entry
122841397 CDS
T07758
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04330
Notch signaling pathway
gaf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122841397 (ncstn)
09133 Signaling molecules and interaction
04519 Cadherin signaling
122841397 (ncstn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ncstrn_small
Nicastrin
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
122841397
NCBI-ProteinID:
XP_043990609
LinkDB
All DBs
Position
LG12:23216776..23230630
Genome browser
AA seq
557 aa
AA seq
DB search
MDLLSNKWIVYLALCLFVAGISCNSVENKIYVKLNYTVPCVRLLNSTHQIGCQSSLSGDV
GVLHVLESEENLDFVLRNGHNPPYMVIMESSLFTRSVMMKLKNGSSRVAGVAVVEPTSNP
PDGFSPHTRCPNENTGVYSENYGPGLAHCNTTKWNPLGNGLSYEEFDFPIFSMKDDNDTQ
LIRQCYMDHNRPVNGSDPQYPLCAMQLSSHMSAVTNTPTCMRRNSISFSMSNGQPDMVCD
PLSDHNIWAPSKPLNTTQNGHKLNESVIIVSARLDSRSFFSEIGPGAESAASGLVTLLAA
AHALRNATQDAQLHRTIFYTFFHGETFDYIGSSKMVYDMEKNQFPIDLDNVHSVLEIGQV
GLHSSSSLWLHTDPVSMRNSSVQEEKHTFLSDNDTVNFYISVEQQASLPTILVKYLLANL
TGTVVNVTQENCRNQKESEDDKESKHLYKYFWVPGAAPPNSTERDGFCVRSTVHLSKAIS
PAFELENYTTSEYSTWTESRWKEIKGRIFLVASHDLEMLTLGVGIGVLLSSLLLTYIMSS
KADILFSSGREPTSATY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttgtcgaacaaatggattgtatatttggcgttatgtctgtttgtcgctggt
atcagttgtaattcagtggaaaacaaaatttacgtgaagctcaactacactgtgccatgt
gtgcgacttcttaattcaacccatcaaataggctgccagtcatctttgtcaggcgatgtt
ggagttctccatgtacttgagtcagaagaaaacctggactttgtgcttcgtaatggccac
aatcctccttacatggtcatcatggagtcttccctctttaccagatccgtcatgatgaag
ctgaagaacggctccagcagggtggccggcgtcgctgtggtggagcccacctccaaccca
ccggacggcttctcccctcacactcgctgtcccaacgagaacacaggtgtgtactcagag
aactacggcccaggtctggcccactgcaacaccacaaagtggaatcccctcggcaacggt
ttatcctatgaggagttcgactttcccatcttctctatgaaagacgacaatgacacacag
ctcatacggcagtgctacatggatcacaaccgtcccgtgaatggcagcgaccctcagtac
cctctctgcgccatgcagctttcctcccacatgtccgccgtcaccaacacacccacctgc
atgaggagaaacagcatcagctttagcatgagtaatggtcagcctgacatggtgtgtgat
cctttgagtgaccacaatatttgggcccctagtaaacctttgaacaccacacaaaacggc
cacaagctaaatgagagcgtgatcatcgtatcagccaggctcgacagcaggtcctttttc
tctgagatcggccccggggcggagagcgcggcctcgggcctcgtcaccctgctggcggcg
gctcacgctctacgaaacgccacgcaggacgctcagctgcaccgaaccatcttctacact
ttcttccacggggaaacgtttgactacatcggcagttcgaaaatggtttacgatatggag
aaaaatcagttcccgatcgatctggacaacgttcactctgtgctggagattggacaggtg
ggattgcattccagctccagcctctggctccacaccgatccggtctctatgaggaatagc
agcgttcaggaagagaaacacacttttctctcagacaacgacacggtgaacttctacatc
agtgtggagcagcaggccagcttaccgactattctggtcaagtacctgttggccaacctg
actgggaccgtcgtcaacgtgacgcaggaaaactgcaggaatcagaaagagagcgaagac
gacaaggagagcaagcatttgtataaatacttctgggttccgggcgcagcaccgcctaac
agtacggagcgagacggattctgcgtccgctccacggtgcatttgtccaaggccatatcc
ccggccttcgagctggagaactacaccaccagcgagtattcgacatggacagagtccagg
tggaaggaaatcaaaggacgcatattcctcgtggccagccacgacctggagatgctgacg
ctcggcgtggggatcggcgtgctgctctcctccctcctgctgacctacatcatgagctcc
aaggctgacatcctcttcagctcagggagggagcctactagcgccacctactga
DBGET
integrated database retrieval system