KEGG   Gambusia affinis (western mosquitofish): 122841545
Entry
122841545         CDS       T07758                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122841545
   04121 Ubiquitin system [BR:gaf04121]
    122841545
Enzymes [BR:gaf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122841545
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122841545
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122841545
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st zf-C3HC4 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 zf-RING_5 Mito_fiss_reg
Other DBs
NCBI-GeneID: 122841545
NCBI-ProteinID: XP_043990866
LinkDB
Position
LG12:complement(11333386..11347247)
AA seq 655 aa
MPSPLFHPEIMDHDVVISSQHSGVALPRETDQDSRDEDHQEVLRFALDQLSLMAMDKVDC
GGGGGGGNGLVDTLDGTQGPGSESCNGVGGGGYVDLQMLEHPSGSRDSPTSCSPSPEYYG
SGGYHMAGSHSMLHGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKT
NTYIKTPVRGEDPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGGPGGGGSLPGP
PHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENV
DRAREEIETHITLRTGTFVDLQGDNDFHTNGTDVSLEGLGSLSGGLGASLWSRATSHHPA
PPPPPPSPPPSLPMSMHHSSSRKMSSSVAYHTHNGGMSSDSFSSNRKPTEGGSPTSPFST
GSSSAGGGFTFGGDSTPGLASSDELGFEFSASNIWAPFVNGGAGSKTSASSQPQQPLRRN
SSGLSGGAITPRLSPTLPQETGVGQLDHPLARRAQSDPLSTLSWLQSGSTGGGGSFSGAS
SSSSGGSSTGYSSCSASSLPGGSPTDSEGGGSTVGITSGMLSHLKGSSAVAALVGVGPGV
NRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSAEPECPVCHTPTTQCIRIFS
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgcctagccctttatttcaccccgagataatggaccacgacgtggtgatcagcagccag
cacagtggcgtggctctgccccgggagacggaccaggactcccgggatgaggaccaccaa
gaagttctccgtttcgccctggaccagctgtcactcatggccatggataaagtggactgt
gggggcggcggcggtggaggcaacgggcttgtggacactctggacgggacccagggtccg
ggctctgagagctgcaacggcgtgggcggagggggctacgtggatttgcagatgctggag
catcccagcggatccagggactcgccgacgtcctgctctccgtctccggagtactacggc
tcgggcgggtaccacatggccgggtcccactccatgctccacggggaacaaagctccgtc
ctctgcaacaggaaaagaagcgtgaacatgactgaatgtgtgcctgtccccagctccgag
catgtcgctgaaatagtggggagacaaggttgtaagatcaaggccctgcgtgccaaaaca
aacacctacataaagactccagtcagaggagaggatccggtcttcatcgtgacggggcgc
agggaggatgtggaaatggccaagcgtgaaattgtatctgcagccgagcatttctccatg
atccgggcgtctcgctgcaaagctggagggccaggcggaggaggctctctgcccggccct
cctcacctaccgggacagaccaccatacaggtgagggtcccctacagagtagttggttta
gtcgtggggccgaaaggagcaaccatcaagcgcatccagcagcagactcacacctacatt
gtgacccccagccgagagaaagaccccgtctttgaggtgacgggaatgccggagaacgtg
gacagagcgagagaggagatcgagacccacattaccctccgaactggaacctttgttgac
cttcagggagacaacgacttccacaccaacgggactgacgttagtctagaaggcctcggt
tccctcagcggggggctcggagcgtctctctggtccagagccacaagccaccaccctgcc
cctccccctccccctccctccccaccgccatctcttcccatgtccatgcaccactcctcc
agccggaagatgtcctcttcggtcgcctatcacacgcacaacggcggcatgagctcagac
agcttcagctccaacaggaagcccaccgagggcggcagccccaccagtcctttcagcaca
ggctccagcagcgctggaggtggcttcaccttcggaggcgactccaccccgggacttgct
tcctcagacgaattgggcttcgagttcagtgcttccaacatctgggcgccttttgtcaat
ggcggggccgggagcaagacctccgcgtcttctcaaccgcagcagcccttgcgccgcaac
agcagcggcctcagcggcggcgccatcaccccgcgactgtctccgactttgcctcaggag
acgggcgtgggccagctggaccacccgctggcccgccgcgcccagagcgaccccctcagc
actctctcctggctgcagtccggcagcacgggcggaggcggctccttctcgggcgcgtcc
agctccagctccggcggctcgtcgaccggctactcctcctgctcggcctcatccctgccc
ggcggctcgcccaccgactccgagggaggcggcagcaccgtgggcatcacctccgggatg
ctgagccacctcaaaggcagctccgcggtggcggcactcgtcggcgtcggccccggcgtc
aacagggactgctttgtgtgtttcgagagcgaggtgacggcggccctcgtgccttgcggc
cacaacctgttctgcatggagtgcgcggggcaaatctgccagtcggccgaacccgaatgc
cctgtctgccacactccgaccacacagtgcatccgcatcttctcctaa

DBGET integrated database retrieval system