Gambusia affinis (western mosquitofish): 122841554
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Entry
122841554 CDS
T07758
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122841554 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122841554 (copb2)
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122841554 (copb2)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122841554 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
122841554
NCBI-ProteinID:
XP_043990890
LinkDB
All DBs
Position
LG12:10344466..10352531
Genome browser
AA seq
934 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWTCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVATSQENNEAVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCIGSSRPAKDYPLVTPNEDRNILEEA
QGYEPKGTFVPLLPQTKESDESSSVPEASETPSQPKPATPEAAVDKEEEEEENLTFAQSE
KEKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagaggaggctaacagcccgatcggaccgagtaaaaagt
gtagatcttcacccaaccgagccatggatgctggccagtctctacaacggcagcgtctgc
gtatggaaccacgaaacgcagactctggtcaagacttttgaggtgtgtgacctgcctgtc
agagcgtccaagtttgtggccaggaagaactgggtcatcaccggagcagatgacatgcag
atccgtgtgtttaactacaacaccttggagagggtccatatgtttgaggctcattctgac
tacatccgttgcattgctgttcatccaacccagccgtacatcttaaccagcagcgatgat
atgctgatcaagctgtgggactgggaaaagaagtggacgtgcagccaagtgtttgagggt
cacactcattatgttatgcagattgtcatcaaccccaaggacaacaaccagtttgccagc
gcctcattggacagaacgattaaggtttggcagctgggctcttcttctcccaacttcact
ttggagggtcatgagaaaggagtgaactgcattgactactacagcggaggagacaagccc
tacctgatctcaggtgcagatgaccgccaggtcaagatttgggattaccagaacaagacc
tgtgttcagactctggagggccacgcccagaatgtctcctgtgtcagcttccaccccgag
ctgcccataattatcacaggatctgaggatggtacggtgcgaatctggcactccagcact
taccgcttggaaagcacactcaactatggcatggagcgagtgtggtgtgtgtgtggtctt
agaggctccaacaatgtggcactgggatatgacgaaggcagcatcatcatcaaagttggt
cgggaggagccagccatgtctatggacgccaatggaaagatcatctgggctaaacacagt
gaaatacagcaagccaacctgaaggccatgggggaagctgaaatcaaggatggggagaga
ctgccgctggctgtcaaagatatgggcagctgtgagatttaccctcaaaccatccagcat
aacccgaatggacggtttgttgtggtatgtggcgatggggagtatatcatctataccgct
atggccctgaggaacaagagcttcggttcagctcaagagttcgtctgggcccacgactca
tccgaatatgccatcagagaaagtagcagtattgtcaaaatcttcaaaaactttaaagaa
aagaaatcctttaaacccgactttggagcagaagggatctacgggggtttcttactcggg
gtgaggtctgtgaacggcctggcattttatgactgggagaacacggagctaattcgccgc
attgagatccagcccaagcacatcttttggtcagactctggtgagttggtctgcattgct
acggaggaatccttcttcattctccgttacatggcagaaaaagtagccacctctcaggaa
aacaatgaggccgtaacagaggatgggattgaagacgcctttgaggtcctgggagagatc
caggagattgtgaagactgggctttgggttggagactgcttcatctacaccagttctgta
aacagactcaactactatgtaggaggagagattgtgactattgcacatctggacaggacc
atgtacctgctgggttacatcccaaaggacgaccgcctttaccttggagacaaggagctc
aacattgtcagctactccctgctggtttctgtcctggagtatcagactgctgtgatgaga
agagattttggaatggcagacaaggtgctgcctaccatccccaaagagcaacggaccagg
gttgcacatttcctggagaaacagggtttcaaacagcaggcactggcagtatctacagac
ccagagcacaggtttgagttggctttacaactgggggagctgaagatcgcctaccagctg
gctgtggaagcagaatctgagcagaaatggaagcagctagccgagctggctatcagtaag
tgccaattcggcttggcccaggagtgcctgcaccacgctcaagattacggcggcctgctc
cttctcgccaccgcttcagggaacgccaccatggtgggcaagctggccgaaggggcagaa
agggacggcaagaacaacgtggccttcatgacgtatttccttcaggggaaactcgatcag
tgtctggagcttctcatcaagaccaaccgactaccggaagcagcgttcctggcgcggaca
tacctgcccagccaggtgtcccgtgtggtcaaactgtggagggagagtttggctaaagtc
aaccagaaggctgctgaatcgcttgcagaccccacagagtatgaaaacttgttccctggg
ctgagagaagcatttgcagctgaacattacctgagagagacctgcatcggcagctccagg
cccgccaaagattacccacttgttacacccaatgaagacagaaatattctggaggaggct
cagggttacgaacccaaaggcacctttgttcccctcctgccccagacaaaagagagcgat
gaatccagctcggtgccagaggcctccgagacgccttcacagcccaaacccgcaactcct
gaagcagcagttgacaaggaggaggaagaggaggaaaatcttacattcgcacagtcagag
aaagagaagactctagatgagttggaagtggacctggacaacatggagctggatgacatc
gacaccacagacgttaaccttgatgacgactttctagacgattga
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