KEGG   Gambusia affinis (western mosquitofish): 122841554
Entry
122841554         CDS       T07758                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gaf04131]
    122841554 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gaf04147]
    122841554 (copb2)
Membrane trafficking [BR:gaf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    122841554 (copb2)
Exosome [BR:gaf04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   122841554 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st DSE1_N ASA1 NBCH_WD40 Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st CFAP251_N Beta-prop_NOL10_N Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Aladin TRM82_WD Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 PAC11 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 TPR_ZFYVE26
Other DBs
NCBI-GeneID: 122841554
NCBI-ProteinID: XP_043990890
LinkDB
Position
LG12:10344466..10352531
AA seq 934 aa
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWTCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVATSQENNEAVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCIGSSRPAKDYPLVTPNEDRNILEEA
QGYEPKGTFVPLLPQTKESDESSSVPEASETPSQPKPATPEAAVDKEEEEEENLTFAQSE
KEKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgcctctgaggctggacattaagaggaggctaacagcccgatcggaccgagtaaaaagt
gtagatcttcacccaaccgagccatggatgctggccagtctctacaacggcagcgtctgc
gtatggaaccacgaaacgcagactctggtcaagacttttgaggtgtgtgacctgcctgtc
agagcgtccaagtttgtggccaggaagaactgggtcatcaccggagcagatgacatgcag
atccgtgtgtttaactacaacaccttggagagggtccatatgtttgaggctcattctgac
tacatccgttgcattgctgttcatccaacccagccgtacatcttaaccagcagcgatgat
atgctgatcaagctgtgggactgggaaaagaagtggacgtgcagccaagtgtttgagggt
cacactcattatgttatgcagattgtcatcaaccccaaggacaacaaccagtttgccagc
gcctcattggacagaacgattaaggtttggcagctgggctcttcttctcccaacttcact
ttggagggtcatgagaaaggagtgaactgcattgactactacagcggaggagacaagccc
tacctgatctcaggtgcagatgaccgccaggtcaagatttgggattaccagaacaagacc
tgtgttcagactctggagggccacgcccagaatgtctcctgtgtcagcttccaccccgag
ctgcccataattatcacaggatctgaggatggtacggtgcgaatctggcactccagcact
taccgcttggaaagcacactcaactatggcatggagcgagtgtggtgtgtgtgtggtctt
agaggctccaacaatgtggcactgggatatgacgaaggcagcatcatcatcaaagttggt
cgggaggagccagccatgtctatggacgccaatggaaagatcatctgggctaaacacagt
gaaatacagcaagccaacctgaaggccatgggggaagctgaaatcaaggatggggagaga
ctgccgctggctgtcaaagatatgggcagctgtgagatttaccctcaaaccatccagcat
aacccgaatggacggtttgttgtggtatgtggcgatggggagtatatcatctataccgct
atggccctgaggaacaagagcttcggttcagctcaagagttcgtctgggcccacgactca
tccgaatatgccatcagagaaagtagcagtattgtcaaaatcttcaaaaactttaaagaa
aagaaatcctttaaacccgactttggagcagaagggatctacgggggtttcttactcggg
gtgaggtctgtgaacggcctggcattttatgactgggagaacacggagctaattcgccgc
attgagatccagcccaagcacatcttttggtcagactctggtgagttggtctgcattgct
acggaggaatccttcttcattctccgttacatggcagaaaaagtagccacctctcaggaa
aacaatgaggccgtaacagaggatgggattgaagacgcctttgaggtcctgggagagatc
caggagattgtgaagactgggctttgggttggagactgcttcatctacaccagttctgta
aacagactcaactactatgtaggaggagagattgtgactattgcacatctggacaggacc
atgtacctgctgggttacatcccaaaggacgaccgcctttaccttggagacaaggagctc
aacattgtcagctactccctgctggtttctgtcctggagtatcagactgctgtgatgaga
agagattttggaatggcagacaaggtgctgcctaccatccccaaagagcaacggaccagg
gttgcacatttcctggagaaacagggtttcaaacagcaggcactggcagtatctacagac
ccagagcacaggtttgagttggctttacaactgggggagctgaagatcgcctaccagctg
gctgtggaagcagaatctgagcagaaatggaagcagctagccgagctggctatcagtaag
tgccaattcggcttggcccaggagtgcctgcaccacgctcaagattacggcggcctgctc
cttctcgccaccgcttcagggaacgccaccatggtgggcaagctggccgaaggggcagaa
agggacggcaagaacaacgtggccttcatgacgtatttccttcaggggaaactcgatcag
tgtctggagcttctcatcaagaccaaccgactaccggaagcagcgttcctggcgcggaca
tacctgcccagccaggtgtcccgtgtggtcaaactgtggagggagagtttggctaaagtc
aaccagaaggctgctgaatcgcttgcagaccccacagagtatgaaaacttgttccctggg
ctgagagaagcatttgcagctgaacattacctgagagagacctgcatcggcagctccagg
cccgccaaagattacccacttgttacacccaatgaagacagaaatattctggaggaggct
cagggttacgaacccaaaggcacctttgttcccctcctgccccagacaaaagagagcgat
gaatccagctcggtgccagaggcctccgagacgccttcacagcccaaacccgcaactcct
gaagcagcagttgacaaggaggaggaagaggaggaaaatcttacattcgcacagtcagag
aaagagaagactctagatgagttggaagtggacctggacaacatggagctggatgacatc
gacaccacagacgttaaccttgatgacgactttctagacgattga

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