Gambusia affinis (western mosquitofish): 122841563
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Entry
122841563 CDS
T07758
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122841563
09142 Cell motility
04814 Motor proteins
122841563
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122841563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122841563
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122841563
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122841563
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122841563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
122841563
NCBI-ProteinID:
XP_043990903
LinkDB
All DBs
Position
LG12:10397474..10408045
Genome browser
AA seq
648 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGESKRGAEGGPAGAEDSDLERKRR
EAEALLQSVGITPDVPHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNA
GPRTLHWDPDPSTLQLHSDSELMGRGMVRLGMSKLIQVDFVPKEMVAYSKETQTPTEALA
HTGQKADEEEDEEISAPPLTEDTQDEKNELSEQQEEDSPKELTEEEKLQVLHSDEFLSFF
ERGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQAGAKLVQNRQFADERWTKNRVVTCLD
WSPQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKATPEYIFHCQSEVMSAGFAKFHPN
LVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGK
MCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKA
GITEVFEGHHGPVTGLSCHSAAGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSSDY
VYDSMWSPAHPALFACVDLSGRLDLWNLNNDTEVPTASVCVEGSSALNRVRWSHSGKEIA
TGDSDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagcgagctgaaggctgagctggagaggaagaagcaacggatcgcccag
atccgcgaggaaaagaagaggaaagaagaggagaaaaaaaagaaggatggagaatccaaa
cgtggtgcggagggaggaccggctggcgccgaagactcagatttggagaggaagaggaga
gaagccgaggctcttctccagagcgttggcatcacccccgacgtcccgcacgctcagccc
ctgagggtagtaacagaagatacgtgtctgtttcactacctagtccccgcccccatgtct
ccctccaacaaatcagtgggcagcgatgctggaagccaagattccggggatggaaacgca
ggaccaaggactttgcattgggatcctgacccctccactctgcaactccactccgactct
gagctgatgggacgtggaatggtaagacttgggatgtccaaactcatccaggtggatttt
gtcccgaaggaaatggtggcctattccaaggagacgcagacacccacagaggcgttggct
cacacaggtcagaaagcagatgaagaagaggacgaggagataagtgctcccccgctgaca
gaggacacccaggatgagaaaaatgagctgagcgaacagcaggaggaagactctcccaag
gagctgacagaggaagagaagctgcaggtccttcattctgacgagttcttgtcgtttttc
gagcgcggcagcagaatcgtggagcgagctctggccgagcaggtggacgtctgcttcgac
tacagcgggagggatctggaggataaagaaggcgacttgcaggcaggagcgaaactggtt
cagaacagacagtttgcagatgagcgctggaccaagaaccgagtggtgacctgcctcgac
tggtctcctcagtacccagagttgctggttgcctcgtataacaacaacgaggacgctcca
catgagccggatggcgtggctctggtctggaacatgaagtacaagaaagccacgcctgag
tacatcttccactgccagtctgaggtgatgtcggctggcttcgcaaagtttcaccctaac
ctggtggtgggcgggacttattccggacagatagtcctgtgggacaacaggagcaacaaa
cgcacgcctgttcaaagaactcccctgtccgcgtcggcgcacacgcacccggtctactgc
gtgaacgtcgtcgggacccagaacgctcacaacctgatcagcatttccactgatggcaag
atgtgctcctggagtctggacatgctctcccagccgcaggacagcctggagctggtgttc
aaacagagcaaggcggtggccgtgacatccatggcgtttcctctgggggatgtaaataac
tttgtggtgggcagcgaggatggctcggtctacaccgcctgtcgtcacggcagtaaggcg
ggcattacagaggtgtttgaaggccaccatggtcctgtgactggactgagctgccacagt
gctgcaggacctgtcgatttctctcacctcttcatctcctcctcctttgactggaccgtc
aaactgtggagcacgaagagcacccgtcctttgtactcattcgaggacagctccgactat
gtctatgactcgatgtggtctcctgcgcatcccgctctgtttgcctgtgtggacctgtcc
ggacggctggatctgtggaacctcaacaacgacaccgaagttccaactgcgagtgtgtgt
gtggaaggatcttcagctctgaaccgtgtgagatggtctcactctggaaaggagatcgcc
accggagactcagacggacaggtgcaggtgtacgacgtaggggagcaaatctgcgttccc
aaagccgacgagtggacgcgtttcgtcaggactctggctgagatcaatgaaaacagagac
gaagctgaggaactggctaacgcctga
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integrated database retrieval system
