Gambusia affinis (western mosquitofish): 122841665
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Entry
122841665 CDS
T07758
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2 isoform X1
KO
K06246
laminin, gamma 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04382
Cornified envelope formation
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122841665 (lamc2)
04518 Integrin signaling
122841665 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122841665 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122841665 (lamc2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
EGF_Teneurin
DUF1664
SAM_KSR1
Fib_alpha
ATG17_like
CCDC39
Prominin
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
122841665
NCBI-ProteinID:
XP_043991095
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All DBs
Position
LG12:complement(27717715..27733776)
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AA seq
1125 aa
AA seq
DB search
MESCWVSLCVVLAALGSVQTTYTSYSDSRCECSGRAWRCLQDAWGLRCLDCQGNTEGRRC
ERCKDGFYQQGARLSCTPCNCNPTGSVSNTCDSRGRCSCKEGVSGDKCDLCPDGPVGADG
CSRRRQEREDSGSLTLPCFCYGHSDRCSARPGFSIHSVSSTFSSGPDGWTAATAQRTTPQ
DVLFRWSPRHQDLEVVSKQSLPTYLYAPDVYLGNKLLSYGQNLSFSLRLDSGVRHPSTSD
VVLEGGGLTVAAALGDLRAVVPCGKKLNYTFRLDEKLSMWKPQLSSFEFQKLLQNLTAIK
IRATFGKDGRGYLDNVNLVSARRGDGVAAGWVRTCTCPPGYEGDFCERCAAGFRRRAPSS
GAFSACEPCSCRGGSCDPQTGDCYSADETSGERSCSEGFYRDPRQQGACERCPCPERSSC
FLEAGALEPQCLRCPQGTFGFYCDTCREGFYGDPAGLRGAQRPCRPCSCNGHIDVSMAGS
CDRNSGECLKCLNNTTGRFCESCLAGFYRNPSTSACKPCSCDILGSEDGQCDAAGRCRCR
AGFQGPRCDRPNCPTCFSPIRKKMELYSVRLKELEILLSGSGRVPTNRAEMEAALRAMED
LMKDLQQNAEQLTDQEKMLQTRLSSISGRQFTEEQKIQNISETLKHIGQQQRTFKSKVEE
VETLIAAMKNLLAEAKTKIQSVDLPVRDDPLTSGSLSSLVQQATGLANEHKATADSVEQA
ANQALSDSKQSLDLIRTLMNKENKVQELIGDLQDLYDKTSADVTSLEKRAGSLSEDAKQE
SKMADGMLKDISRLEKNLPPSMKDAVDAMVTRLDALKEAQKNISAVDDLLGAAEKDRTGA
KELLDQGQTAQQEFNKLLDRVGAAKAETEKALQGAGTNNDLDDTLNTLRGFDQQIGDSKS
GADEAVKRLPNISSTIQEAVGKNVQTQSVLDAASKDHDEAMGNINALDGLAKNLQNTAGS
LPNADGLVSEADKLNQEAKNLKAGAEQTAAGLKDGLKEVKGLAAGAEEAVAGATAALANA
KQSKDAVQETLRSVSNMLATLNSGDVVDEEQLMKLEAALVRAEEEVQQLLRPRLEKVEDQ
EEAHRRRLAAINTDIDGILRDIANLEDIRNSIPAGCYNTPPIEEP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggagagctgctgggtttccctctgcgtggttctggccgctctgggctcggtccagacc
acctacacctcctactcagactcccgctgcgagtgcagcggccgggcgtggcgctgcctg
caggacgcctggggtctgcgctgcctggactgtcagggaaacaccgagggtcgacgctgc
gagcgctgcaaggacggattctaccagcagggggcgcggctgagctgcacgccctgcaac
tgcaaccccacaggttcagttagcaacacgtgtgacagcagggggcgctgcagctgtaag
gaaggcgtctctggagacaaatgtgacctttgccccgacggcccggtgggagcggacggc
tgcagcaggaggcgccaggaaagagaggattctgggagtttgactctgccgtgtttctgt
tacggacacagtgatcgttgttctgctcggcctggtttctccatccacagcgtctcctcc
accttcagctcaggtccggacggctggacggcggcgacggcccagcgtacgactcctcag
gacgttctgttccgctggtcgcccagacaccaggacctggaggtagtgtccaagcaaagc
ctgcccacttacctgtacgcaccagacgtttacctggggaacaaactgctgagttacggc
cagaacctgtccttctcgctgcgtttggacagcggcgttcgccacccgtccaccagcgac
gtcgtcctggagggcggcggcctgacggtggcggcggcgctgggggacctgagggccgtt
gtcccttgtgggaagaagctcaactacaccttcaggctggatgagaagctcagcatgtgg
aaacctcaactttcctcattcgagttccagaagcttctccagaacctgacggccataaag
atccgggccacgtttggaaaagatggacgcggttaccttgacaacgtgaacctggtttcg
gctcggcgtggcgacggcgtggcggccggctgggtccggacctgcacatgtccaccggga
tacgagggcgacttctgtgagcgctgcgcggccgggttcaggcgccgggcgccgtcatcc
ggggccttcagcgcctgcgagccgtgcagctgcaggggcggcagctgcgacccccagacc
ggagactgttactccgcagacgagacgtccggcgagcggagctgctccgaggggttctac
agagacccgcggcagcagggggcctgtgagcgctgcccctgtccggagaggtcgtcctgc
tttctggaggccggagctctggagcctcagtgcctccgctgtccgcagggaaccttcggg
ttttactgcgacacctgtcgggagggtttctatggcgaccccgcaggtctgcgaggcgca
cagcgaccctgcagaccctgcagctgcaacggtcacattgacgtcagcatggcgggaagc
tgcgaccgcaacagcggagaatgcctgaagtgtctgaacaacacgaccggtcggttctgt
gagagctgcctggccgggttctaccggaacccgtccaccagcgcctgcaaaccctgcagc
tgtgacatcctgggctcagaggacggccagtgcgacgcggccggacggtgccggtgccga
gcgggcttccagggtccgaggtgtgaccggcccaactgccccacctgcttcagccccatc
aggaagaagatggagctttactccgtcagactgaaggagctggagatcctgctgtctggg
tcgggtcgggttccgaccaaccgggctgagatggaggcggctctgagagcgatggaggat
ctgatgaaggacctgcagcagaacgccgagcagctgacggatcaggagaagatgctgcag
actcgcctgtcgtccatcagcggccgtcagttcactgaagaacagaagatccagaacatc
tcagagacgctcaaacacatcggccagcagcagcggaccttcaagtccaaggtggaggag
gtggagactctgatcgctgccatgaaaaaccttctggcggaggcaaaaaccaagatccag
tccgtggatcttcctgtccgcgatgatccactgacttcaggctcgctgtcctctctggtg
cagcaggcgacaggcctggccaatgaacacaaagcgacggcggactctgtggagcaggcg
gccaaccaggctctgagcgactccaagcagagtctggatctgatccggactctgatgaac
aaggagaacaaagtccaggagctgatcggagatctgcaggatctatacgataaaacctca
gcagatgtgacgagtttggagaagcgagcaggaagtctgagcgaagacgccaaacaggag
agcaagatggccgacggcatgctgaaagacatttccaggctggagaagaacctcccaccg
tccatgaaggatgctgtggacgccatggtaaccaggctggacgccttgaaggaggcgcag
aagaacatctccgccgtggacgatctgctgggcgctgcggagaaagaccggaccggcgcc
aaggagctgctggatcagggccaaaccgcccagcaggagttcaacaagctgctggaccgg
gtcggcgccgctaaagcggaaaccgagaaagctctgcaaggcgccggtaccaacaacgac
ctggacgacaccctgaacaccctgagaggtttcgaccagcagatcggcgacagtaaatct
ggagctgatgaagccgtcaagcgtcttccgaacatcagcagcaccatccaggaagctgtg
ggtaaaaacgtccagacccagtcggttctggacgcggcgtccaaagatcacgacgaggcg
atgggaaacatcaacgcgctggacggcttggccaaaaacctccagaacacggccgggtcg
ctgccgaatgctgacggtttggtgagcgaagccgacaaactgaaccaggaggccaagaac
ctgaaggccggagcggagcagacggccgccgggctgaaggacgggctgaaggaggtgaag
gggctggctgctggagcggaggaggcggttgccggagcgaccgcggcgctcgccaacgcc
aagcagagcaaagacgccgttcaggaaacgctgagatccgtcagcaacatgctggccacc
ctgaactccggagacgttgtggacgaggagcagctgatgaagctggaggcggctctggtc
cgggcggaggaggaggtgcagcagctcctgcggccgcggctggagaaggtggaggaccag
gaggaggcgcatcgccggcgcctcgccgccatcaacacggacatcgacggcatcctgagg
gacatcgccaacctggaggacatccggaacagcatccctgctggctgctacaacaccccg
cccatcgaggagccctga
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