Gambusia affinis (western mosquitofish): 122841826
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Entry
122841826 CDS
T07758
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122841826 (fubp1)
03041 Spliceosome [BR:
gaf03041
]
122841826 (fubp1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122841826 (fubp1)
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122841826 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
122841826
NCBI-ProteinID:
XP_043991354
LinkDB
All DBs
Position
LG12:22345339..22358618
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AA seq
667 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVVAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIEQPETKKVATNDAFSAMGGMGGPPRSTSEEFKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGMPDRSVTLTGAPESIQAAKRLLTEIVEKGRPAPAFHHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGDPF
KVQQAKEMVMELIREQGFREQRGEYGSRVGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQN
DTGVRIQFKPDDGTTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRG
QGNWNMGPPGGLQEFSFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNI
KMFTVRGNPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGAPMG
PYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYG
QQPQASMTPTSGAPGTAQPNGQGDPQAAGQSGQTDYTKAWEEYYKKMGQQNQPPQDYTKA
WEEYYKKQGQAAPQAAPAAAAPAAQPGGQPDYSAAWAEYYRQQAAYYGTGNPQSMGAAPQ
APQVRHE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacagcagcgtggctcctccgtcctctaacgctggtggggggatgaacgat
gcttttaaagacgctttacagcgagcgagacagatcgcagccaagatcggcggagatggc
gttgtggctcctccaacgaacgagttcggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaacaaccagaaacaaagaaagta
gctacaaatgacgccttctcagccatgggagggatgggtggccctccaagatcaacatca
gaggaattcaaggttccagatggaatggttggatttattattggaagaggaggtgaacaa
atatcccgcatccagcaggaatctgggtgtaaaatacagattgctcctgacagcggaggg
atgcctgacaggtcggtgacattaacgggggcaccagaatcaatccaggccgcaaagaga
cttcttactgagatcgtggagaagggacgtccggctcctgctttccaccacaacgacggt
ccaggaatgacggtccaggaaattatggtgcctgcttccaaagctggcctcgtcattggg
aagggaggagagaccatcaaaagccttcaggaacgagccggtgtgaagatggtcatgatc
caagacggacctcagaacacgggagcagacaagccactccgcatttctggagacccattt
aaagtccagcaagccaaagagatggtgatggagctgatcagagagcagggcttcagggag
cagcggggcgagtacgggtccagggtcggaggaggagacagcttagatgttccagtcccg
cggtttgcagttgggattgtcatcggcagaaatggagagatgataaagaaaatacagaat
gacacaggagtcagaattcagttcaaaccagatgatggcaccacgcctgacaggatagca
cagatcatgggccctccagaccaggcccagcatgcagcagagatcatctcggacctgttg
aggagcgtccaggctggaggccctccgggacacggagggggcaggggacgtggtcgtggg
cagggcaactggaacatggggccccctggtggcctgcaggaattctcctttacagtccca
accatgaagaccgggctgatcattggaaaagggggcgagacgatcaaaggcatcagccag
cagtcgggagccaggattgagctgcagaggaatcctccacccaacgccgaccccaacata
aagatgttcaccgtcagaggaaaccctcagcagatcgactacgccaggcagctggtggag
gagaagattgggggtccagtcactccgatgggaggcccacatggtcccccaggtccacat
ggtgggccaggtccgcatggtcctccgggaccaccaggacccccaggcgctccaatggga
ccttacaaccctggaccttacaaccaagggcctccaggaccacatggccctcctgctcct
tatcagcctcaaggatgggggaacggttatcctcactggcagcagggccagccggatcca
aataaagcagcagcggatgccaacgcagcagcgtgggcagcgtactacgctcagtacggc
cagcagccccaggcctccatgactccaaccagcggggctccaggcacggctcaacccaac
ggtcaaggtgacccacaggctgcaggtcagagtggacagacagattacaccaaggcctgg
gaggaatattacaagaaaatgggtcaacagaaccagccacctcaggactacacgaaagcc
tgggaggagtattacaagaaacaaggtcaagccgcaccgcaggctgctccagcggcggca
gcgccggccgctcagcctggaggccagccggactacagcgccgcctgggccgagtactac
cgccagcaggctgcctactacggcaccggaaaccctcagtcgatgggtgcagcgccacaa
gcccctcaggtacgccacgaataa
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