Gambusia affinis (western mosquitofish): 122842043
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Entry
122842043 CDS
T07758
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04371
Apelin signaling pathway
gaf04514
Cell adhesion molecules
gaf04520
Adherens junction
gaf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122842043
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122842043
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122842043
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122842043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122842043
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122842043
04090 CD molecules [BR:
gaf04090
]
122842043
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122842043
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Major cadherins
122842043
CD molecules [BR:
gaf04090
]
Proteins
122842043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
122842043
NCBI-ProteinID:
XP_043991476
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All DBs
Position
LG13:complement(3718205..3736982)
Genome browser
AA seq
888 aa
AA seq
DB search
MGTNWLIIWSVVITLFQVSTVATAEESSCVPGFQSKLLILNVTQKHLRHGTILGKVGFTD
CTSHTRFLFSSDDDRFLVRTDGMLMVKRRVILHEGNQRFSIHSLTARGQQLTLPVMVLYR
RIHHRDNEPLDHTEMSSTNNTKVPILYFPKPNPGLKRRKRAWSIPPIGFPENFRGPYPHS
LTRIRSDEDKMKKIIYSITGPGADQPPIGFFTMDRDTGHLYVTQELDREKQDMYMLQALA
RTEGGTNAEEPTDIIINIIDQNDNKPVFNQSTYKGEVPEASEKDFDVVQVVATDADQPNT
DNSDIRYRIMSQKPEEPSPNIFTINPTTGVIRVNEPGLDREKVPTYELEVQAADMKGEGL
TGFTKVIIKVTDRNDHAPVFTQSKYNATVEENKVDALIVKMSVTDNDEPHTMAWNAKFKI
IDGDPGNLFTVVTGTNKQEGIITTAKGLDFERASKHTLLVTVENEAPFAVPLVTSTATVV
VTVVDVNEPPIFDSEEKQVSKREDLAKNSIVAQYTASDPDTGRKQKVMYKVIKDPGGWLN
VDKETGVITVKTQMDRESPLVTEEKYTALIGAYDDDQNPATGTGTLIIKLDDVNDNPPTI
VEREFEMCNKKPIPYVLSVTDKDGTGFTFPYGVNIRDSSKAKWTVEMNDTGTGIIVRLKP
DIEKGNYKVAMSVSDNQGLSQVSTVAAKVCDCTGPPICKDGTRTAAGSSPWVIGGVLLLV
LVGTVIALTMYLKKTRGSKDRVKGNEKSEDDDRDELIICNEEGGGESIQQSYSESVLHFA
LTNKSDMPRIVMAAPLGSGPSYKPRPTNPDELGDFIAHNLKVADTDLTAPPYDSLLVFDL
EGGSSEAEQLSSLCSSSDGEQDYDSIREYGPRFKKLADMCGGGDDDMM
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaactggctcatcatttggagcgttgtgatcactttatttcaggtctccaca
gtcgcgactgcagaggagtcatcatgtgtgcctggttttcagtccaagttgttgatattg
aatgtgacccaaaagcacctgagacatggcacaatactgggcaaagttggcttcactgac
tgcacaagccacacaagattccttttcagctctgatgacgaccgttttctggtccggaca
gatgggatgttaatggtaaagagacgagtcattcttcatgagggaaaccaacgcttctcc
atccactccctgactgcacgaggtcagcagctgactcttcctgtcatggttttgtaccga
cggattcaccacagggacaacgagccgctcgatcacactgaaatgagttccactaataac
acaaaggttcccattctgtatttcccaaaacctaatccaggactgaagaggaggaagaga
gcctggtctatccctcccattggttttcctgagaatttcagaggaccttatccccattct
cttactcggattcgctctgatgaagataaaatgaagaagatcatttacagcatcactggt
cctggagctgatcagcctcctataggttttttcaccatggatagagacactggtcatctg
tatgtcacacaggaactggacagagagaaacaggacatgtacatgcttcaagctcttgcc
aggacagagggtggcacaaatgcagaggagcctacggatattataatcaatataattgac
cagaatgacaacaaacctgttttcaatcaatctacctataagggagaagttccagaggcc
tcagaaaaagattttgacgtggttcaggttgtggccacagatgctgatcagccaaatact
gacaactctgatatcaggtaccgtataatgagtcagaagccagaggagcccagtcccaac
atatttaccatcaatccaacaactggagtcatcagagtcaacgagcctggactggaccga
gagaaagtcccaacgtatgaactggaagtacaggcagctgacatgaagggagaaggtttg
actggatttaccaaagtgattatcaaagtgacagaccgcaacgatcacgctccagtcttt
acacagtccaaatataacgctacagttgaagagaacaaagtagacgctctaattgttaag
atgtcggtgacggacaatgatgagcctcataccatggcctggaatgcaaagttcaaaatc
attgatggagatccaggaaatctgtttactgtggtaacaggaacaaacaaacaagaagga
atcatcaccactgctaagggtctggactttgagagagccagtaaacacactctactggtc
acagtggagaatgaggctccttttgctgtcccactggtcacttccactgctacagtggtg
gtgaccgtggtggatgtcaatgaacctcccatctttgattcagaagagaagcaggtttcc
aaacgtgaggatcttgctaagaacagcattgtggcgcagtacacagcttctgatccagac
actggacgcaaacagaaagtcatgtataaggtgatcaaggacccaggtggctggctcaat
gtcgacaaggaaaccggagtaatcacagtgaaaacccaaatggacagagaatctccactt
gtcacagaggagaaatacacagccctgattggtgcatatgatgacgatcagaacccagct
acaggaaccggtactttgattatcaagcttgacgatgtcaatgacaaccctcccaccatt
gttgagcgtgaatttgagatgtgtaacaagaaaccaattccttatgtgctgagtgtaacg
gataaagatggaacaggttttacttttccatacggtgtcaacattcgggactcttcaaag
gctaagtggaccgttgagatgaacgacactggcacaggcattatcgtgagattaaagcct
gatattgaaaaaggaaactacaaggtggccatgagtgtttcagacaaccagggtctgtca
caggtcagcacggttgcagctaaagtgtgtgactgcactggaccaccaatctgcaaggat
ggcacgaggactgctgctgggtccagtccttgggtcattgggggagttcttttattggtg
ctggtgggaactgtgattgccttgaccatgtatttaaagaagacaagaggaagtaaagac
agagtgaaaggaaatgaaaaaagtgaagatgatgacagggatgagcttataatctgtaat
gaagagggaggtggagagagcattcagcagagttatagtgagagtgtcctccactttgct
ctgaccaacaagtctgacatgcccaggatcgtcatggctgctccgcttggatccggcccc
tcgtacaaacctcggcccaccaacccagatgagctcggggattttattgcccataacctg
aaggtggcagatacagacctcactgctcccccctacgactccctgctggtgttcgatttg
gaaggaggcagttctgaggcagaacaactctcgtctctgtgctcctcgagcgacggagag
caagactacgattccatccgagaatatggccctcgcttcaagaagctggccgacatgtgc
ggaggaggagatgatgacatgatgtga
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