KEGG   Gambusia affinis (western mosquitofish): 122842074
Entry
122842074         CDS       T07758                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03082  ATP-dependent chromatin remodeling
gaf03083  Polycomb repressive complex
gaf04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122842074 (rbb4l)
   03083 Polycomb repressive complex
    122842074 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122842074 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122842074 (rbb4l)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     122842074 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     122842074 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     122842074 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     122842074 (rbb4l)
    PRC2.2
     122842074 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     122842074 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122842074 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    122842074 (rbb4l)
   NuRF complex
    122842074 (rbb4l)
   NuRF complex (fruit fly)
    122842074 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122842074
NCBI-ProteinID: XP_043991538
LinkDB
Position
LG02:complement(32020675..32031240)
AA seq 426 aa
MAEKEVYDDAVEERVINEEYKIWKRNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDPSHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGTGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSSEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQG
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggctgaaaaggaggtgtatgatgatgcagtggaagaaagggtcatcaatgaagaatac
aagatctggaagaggaacactccatttctctacgacctggtcatgacccatgccctggag
tggcccagtctgactgtgcagtggcttccagatgtcaacagaccagaagggaaggactac
acagtccaccggctggttctggggacccacacatcagatgagcaaaaccatcttgtaata
gccagtgtccaggtaccaaatgacgacgcccagtttgatccatcacactacgatagtgaa
aaaggagcagagtttggcgggtttggctcagtgagtgggaaaatagagattgagatcaag
atcaaccatgaaggagaggtgaaccgagcacgctacatgccccagaatccctgcattatt
gccaccaaaacgcccacatctgacgttctggtctttgactataccaagcacccatcaaag
ccagatcccagtggggagtgcagtcctgatctgaggctcaaaggtcaccagaaagaaggt
tatggcctatcctggaatccaaacctcagtggcaacctgctcagtgcctctgatgaccat
accatctgtctgtgggacatcggcactggcccaaaggaaggaaaaattgtcgacgccaag
accatcttcactggtcacaccgcagttgtggaagacgtgtcgtggcatttactccatgaa
tccttgtttggctctgttgctgatgatcagaaactaatgatatgggacactcgttctaac
aacacttctaaagccagccattcggttgatgctcacactgctgaggtcaactgtctgagc
ttcaatccctacagcgagttcattcttgctacaggttctgcagataagactgttgcattg
tgggatctaaggaatctcaaactgaagctccactcttttgagtcccacaaagatgaaatt
ttccaagtccagtggtcacctcacaatgaaaccatcctggcctccagcggtactgaccga
cgtctcaacgtctgggatctcagtaaaattggggaggagcagtcttcagaggacgctgag
gacggtccaccagagcttctgttcattcatggtggccacacagccaagatatcagacttc
tcctggaaccccaatgaaccctgggtcatctgctctgtgtccgaagacaacatcatgcaa
gtctggcagatggcagagaatatctacaatgatgaggagccagacaacacacccgcatca
gagctggaggctcaaggataa

DBGET integrated database retrieval system