Gambusia affinis (western mosquitofish): 122842077
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Entry
122842077 CDS
T07758
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122842077 (arid5b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
ARID
122842077 (arid5b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
122842077
NCBI-ProteinID:
XP_043991539
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All DBs
Position
LG13:complement(8164245..8273145)
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AA seq
1179 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKCTRDGKARILALGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRSVAHGEHEVIAVSEKVIVRLQDLVKWTVPDFSGW
ANGLKVEPLKPSVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKVL
VLSYSQYCRYRSVLARLREQPSSLFIDHTVLALGGIPALGGSTRILYCRDTFEHPTLLQN
ESICDEFAPNLKGRPRKKKLSISQRRDTQGQAPGQGSSGSTQGSAAVAAPDPSSPESKPT
TKVKPGCKTVPNGKLTTPGKQRPAGLSKKSSPEEKERGKEKDKEERSEKKDERKDEETSE
ESRAEEQSFLVELYKYMKERDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWK
HVYDELGGNPSSTSAATCTRRHYERLLLPYERHLKGEQDKPLPLAKPRKQEGSQEKASGA
GVKVKVVGPKKLKGPNHPKLSSKKDRGEVKQELTQESKVKEDNHEISTAIKIDAALQDEP
IVIEEEELHVTLKKEESLAVEQPSSLCLKESDCRSPHSGFSLHTGPSAQPEWRQIGEALQ
AKLAGEQQTEGHFIPKTSFLLPRWDQTKAAGHVALPEHFSKVKDCIENHGGRVGKVLPMC
KQVDGQCIDLSTDSYSEKDDYGAIKKESTQTAVYCKANQGVMSPLAKKKLLSQVCESNPY
SFSSLQSPPPAAVSSLHRGDREKEKRKSEEELLGQRYQGASDSIPEVSPIFRPSVIQHAQ
SSKAHQHTSGGQSERIAAAELSDSYSRTSHQIQPQASVPWQPYLTRTQTQDCAETAGKKI
LQGPVTQCRSYTGDCYSSPHLHRLYRQTESCLSQERMAGFPGGERREHYSREGEGGQSFV
CAGLEQEGLVYRSHYGDRTQTQAENGEAEDEPRDFSISKPLSQRVSSFSKPSFCSLSYPI
MHHGLDSHPKACRVSPMTISTPKQSSPDTSQSFPSPKASGELSLNSPIRPGKRSLAEADS
EDAPERKVRVVTPIHPASTVRRSDPEELKPAEPAHAIHLNNHLPEGHSMTAYPPPHTAPL
YAGIYPHGTLVSPGSQDGLQQHPGLQYLKSQSAVSPLMPPFTIHSMMLHRQLLASSPSPH
HLYRYPGGAALYGELLHHLYPLSTLPPPQLSSVHPSTRL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcggtttacatggaccatatata
ttctataaagcctttaaatgtacccgggatggcaaagcgagaatcctcgctctcggagac
tttttcttcgtcagatgcaaacccgaggatcctatatgcatagcggagctccagcttctc
tgggaggaaagaacaagcaagcaacttttatccagctccaaactttatttcctacccgag
gatactccccagggacgatccgtcgctcacggagagcacgaggtcatcgccgtgtccgag
aaggtgatcgtgcgactccaggacctggtgaagtggacggtaccggacttctcgggatgg
gccaacggtctgaaggtggagccgctcaaaccctcggtgctccgcgagctggggaccaac
gggcggcgcgaggccctccaccgctacagggagagcacgctgaccagcggcctcaacttc
aaggatgtccagagggagcgggcgcagctaggacaagaagaggatggacggaaagtgtta
gtcctcagttactcccagtactgtcgctaccgctccgttctggctcggctcagagagcag
ccgtcctcgctgttcatcgatcacacggtgctggcgctgggcggtattcctgcactgggc
ggcagcacgagaatcctgtactgccgcgacaccttcgaacaccccaccctgcttcagaat
gagagcatctgcgacgagtttgctccgaacctgaaggggcgacctcgaaagaagaagctt
tccatctctcagaggagggacacccagggtcaagctccaggtcagggctcgtcggggtcg
acccagggttcagcagctgtggcagctccggacccctcgagcccagagagcaaacctaca
accaaggtcaagcccggctgtaaaacggtacccaacggaaaactaaccacgccgggcaaa
caaaggcccgccgggctcagtaagaagtcctcacctgaggagaaggagagaggaaaggag
aaggacaaggaggagaggagtgagaaaaaggacgagaggaaagatgaggagacttcagag
gagagccgcgcggaggagcagtctttcttggtagagctctacaagtacatgaaagaacga
gacacgcccatagagaggatccccttcctcggcttcaaacagatcaacctttggaccatg
tttcaagctgctcagaaacttggaggatatgagttgatcacggtgcgcaggcagtggaag
cacgtatacgacgagttgggcggaaaccccagcagcacaagcgccgccacgtgtacgcgg
aggcactacgaaaggctcctccttccttacgagaggcaccttaaaggcgaacaggacaag
cccctcccgctggccaaacccaggaagcaggagggcagccaagagaaggcgtctggagcc
ggcgtcaaagtgaaagtagtagggcccaagaaactgaaaggccccaaccatccgaagctg
agtagtaagaaggacagaggagaggtgaaacaagaactaacacaggagtcaaaggtgaaa
gaagacaaccatgagatctccacagccataaaaatcgacgccgctcttcaagacgaaccg
attgtaatagaggaggaagagttacatgtcaccctgaagaaagaggagtcgttggccgtg
gagcagccgtcctcgctctgcctcaaagaatctgactgcagatcgccccacagtggtttc
tccctccacacagggccttccgcccaaccagaatggaggcagatcggcgaggcgctccaa
gcgaagctcgcaggcgaacagcaaactgaagggcatttcattccaaaaacgtctttcctg
cttccccgctgggatcagactaaagctgctggacatgtggctctgcctgagcacttctcc
aaggtcaaagactgcattgagaatcatggcgggagagtggggaaagtgttgcctatgtgc
aagcaggtggatggacagtgtatagatttgagcacggattcttactcggagaaggacgac
tacggggcgattaagaaggagtcgacccagacagccgtctactgcaaagccaaccagggg
gtcatgtctccgttggctaaaaagaagctcctgtcccaggtgtgcgagtccaacccgtac
tccttttcctctcttcagtctccccctcccgcagcggtgtcctctctccatcgaggtgat
cgagagaaggagaaaagaaagagtgaagaagagttgctgggacaaaggtaccagggtgcg
tccgacagcatccctgaggtctcgcccatattcaggccgtcggtgatccagcacgcacaa
agcagcaaggctcaccaacacaccagcggagggcaatcggagaggatcgctgcggcggag
ctgtcggactcttacagccggacgagtcatcaaattcagccgcaggcgagcgtgccctgg
cagccgtaccttaccagaacccaaacccaggactgtgcggagaccgccgggaaaaaaatc
ctccaaggtccagtcacccagtgcaggagctatacgggggactgctactcatcccctcac
cttcacagattgtacagacagactgagagctgcctgagccaagagagaatggctggcttt
cctggcggagagcggagagagcactacagcagggagggcgagggcggccaaagctttgtc
tgtgccggtctggagcaggaagggttggtgtacagatctcactacggtgacaggactcag
acgcaagcagagaatggagaggctgaagacgagcccagagacttttctatttctaaacct
ctatctcaaagggtttcctccttttccaagccctctttctgtagtctctcctatcccatc
atgcaccacggtttggattcccatcctaaggcgtgcagagtctcgcctatgacaatctct
acccccaaacaaagctcaccagatacttctcagtcgtttcccagccccaaagcctcaggc
gaactgtccctcaacagtcccattcggcccggtaagcgaagcctggcagaggcggacagc
gaagacgccccggagaggaaggtgcgagtggtgacccctattcacccggccagcacagtc
cgacgaagcgaccctgaggagctgaaacccgctgagccagcccacgccattcacctcaac
aatcatctccccgagggccactctatgaccgcctaccctccgccccacaccgcgcccctc
tatgctggcatttatccacacggcacgctggtgtcaccaggctcccaggatgggctccag
cagcacccgggcctgcagtacctgaaaagccagtcggccgtgtccccgctaatgccccct
ttcaccatccactccatgatgctccacaggcagctgctagcctccagccccagcccccac
cacctctacaggtacccgggcggggcggcactgtacggagagctgttgcaccacctctac
cctctctcgaccctccccccacctcagctgtcgtcggtacaccccagcaccagactttga
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integrated database retrieval system
