KEGG   Gambusia affinis (western mosquitofish): 122842125
Entry
122842125         CDS       T07758                                 
Name
(RefSeq) protein bicaudal C homolog 1-like
  KO
K18756  protein bicaudal C
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122842125
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122842125
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd KH_2 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 122842125
NCBI-ProteinID: XP_043991655
LinkDB
Position
LG13:9950601..10018023
AA seq 967 aa
MAAQCDTLSGYLQQQQSDQGSNSERSTDSPLPGSEEDLSGPHPLPDPEWTEERFRVDRKK
LEIMLLAASEGRVNGGEDFFQKIMDETQTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVRE
AKYRIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNNQA
EKSNQVSIAGQPAGVEAARVKIRELLPLVLSFELPAIMQSDPSSPTVQHISQTYNLTVSF
KPPTRLYRATGVIRGSQNNVNAVKRGTALLLEHLAGSLASTISITTHLDIAPQHHLFMKG
RNGSNIKHITQRTGAQIHFPDPNGPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIK
EDIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARRFLLGLESNG
VSCSSPSLALNPTTNGPSPSLICPVGLDILTSAGLGLSNLGFLGATAPHSLPASATPNTV
LNSLNSALSPLQTPSPSTPTPAPSMWPSSLTSTQSFTSQLVLHPQATLSSILMSGVQGYT
HSTPSPPPGLAPIDKQPNGVPECALNGHVKHPGYGRLATASLTETVLSPTPCDSAQEASG
HSPSEPLSSKSNPDEGSDTFVEVGMPRSPSHSANGSELKQMLASCKTSSGKRQAVELLQG
TKNSHLHSDCLLSDAESSSSDGPVADKRAPGSERAAERAAQQNERERIRLVPQTSFANMQ
AFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVPYKPSM
STTYEGSPLSLSRSGSREGVGNGSDSDNWRERNGNGLPNHTEFPSAVSSPKRKQNKSAAE
HYLSSSNYMDSISSVTGSNGCSLNSSLKGSDLPELFSKLGLGKYTDVFQQQEIDLQTFLT
LTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPIRSSFLEGGASGRLSRQFHAEV
ASVSGRW
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgacactctgagcggatacttgcagcagcagcagtcggaccagggc
tcaaacagcgagcgcagcaccgactcccctctccccggatcagaggaggacctcagcggg
ccccatccgctaccagacccggagtggaccgaggagaggttccgtgtggaccgtaagaag
ctggaaatcatgttgttagctgcctccgaggggagagtgaacggcggagaggatttcttt
cagaagatcatggatgaaacccaaacacagatagcctggccttccaaactgaagattgga
gccaagtccaaaaaagatccacacatcaaggtgtgtggaaaacgagataacgtgagggaa
gctaaatacagaatcatgtctgtccttgacacaaagagcaacagggtgacgctgaagatg
gacgtttcccacacagagcactcgcatgtcatcggcaaaggtgggaataacatcaagagg
gtgatggaggagacggggtgccatatccattttcctgactcaaacaggaacaaccaggca
gagaaaagcaaccaggtgtctatcgcagggcagccagcaggcgtggaggcagcacgtgta
aaaataagggagctgctacctctcgtgctgtccttcgagcttccagccatcatgcagtca
gaccccagctctcccactgtgcagcacatctcacagacgtacaacctcacagtttccttc
aagcccccgacgcgtctctacagggccaccggagtcattcgtggttcacagaataatgtc
aacgcagtaaagagaggcacagctctgttgctggaacatctggccggtagtctggcaagt
accatctccatcaccacccacctcgacatcgcgccgcagcaccacctttttatgaaggga
cgcaacggcagcaacatcaagcacatcacccagaggaccggagcccagatccacttcccc
gaccccaacggcccccagaagaaatccaccgtttacattcagggcaccatcgaatccgtc
tgcctggcgcggcagtatctcatgggctgcttgcctctggtattaatgtttgacatcaaa
gaggacatcgaggtggaacctcagtgcatcacggcactaatggagcagctggacgtcttc
atcagcatcaaaccaaagccaaagcaacccagcaagtccgtgatagtgaagagtgtggag
aggaacgccgtcaacatgtacgaagctcggcgtttcctcttgggtctcgagagcaacggg
gtgtcctgttcttcaccctccctggcactgaatcccaccactaatggtccatcgccgtcc
ctcatatgccccgttggcctggacatcctgacctcagctggcctggggctgagtaatctg
ggtttcctaggtgcgacggcgccccattccctccccgcctcggccaccccgaacacggtt
ctgaacagcctgaactcggctctgagccccctgcagacgccgagccccagcacccccacg
ccagcgccctccatgtggcccagttcgctcaccagcactcaaagctttacgtcccagctg
gtgctgcaccctcaggccaccctgagcagcatcctgatgtcaggcgtgcagggttacaca
cacagcacgccgtctcctccgcccggcctcgcccccatagacaagcagccaaacggggtc
cctgaatgcgcgctaaacggacacgtcaagcatcctggttacgggaggttagcgacggca
tccctcacagaaaccgtcttaagtccgactccatgcgactcggcccaggaggccagtgga
cacagtccttcagagccgctgtcaagcaagtctaacccagacgaaggctctgacacattt
gtggaagtgggcatgccgagaagcccctctcactcagccaatgggagcgagctgaaacag
atgctggcttcgtgcaagacgtcatctgggaagcgacaggctgtggagctcctgcagggc
accaagaactcccatctacattctgactgcctcctgtcggacgccgagtccagctcgtcg
gacggtcctgtggcggataagagggcaccgggcagtgagcgggcagccgaacgggcagca
cagcaaaacgagagggagaggatccgactggtgccgcagacttcttttgctaacatgcag
gcgttcgactacgaacagaaaaagctgttggcgaccaaagcaatgctaaagaaacccgtg
gtgacggaggtgcggaccccgaccaacacctggagcggtctgggcttctcaaagtccatg
ccagctgagaccatcaaggagctgcggagagccaatcacgtcccgtacaaacccagcatg
agcaccacgtatgagggttctccactgtccctgtctcgatccggcagccgggaaggcgtg
ggaaatggcagtgactcggacaactggagggagagaaacgggaacggtctgccgaaccac
acagagttcccctccgcggtcagcagcccgaagaggaagcagaacaaatctgctgcagag
cattacctcagcagcagcaactacatggactcaatctcttcggtaaccggcagcaacggc
tgcagcctgaattcatccctgaaaggctccgacttgcctgagctcttcagcaagctgggc
ttagggaaatacaccgacgtcttccagcagcaggagattgacctccagacattcttgact
ctaacagaccaggacctgaaggaactaggaatcaccacctttggtgctcgcaggaaaatg
ctacttgccatttcagaactaaacaagaaccgaaggaagctttttgagccacccatcagg
tcctccttcctggaggggggagccagcggccgactctcccgccagtttcacgccgaagtg
gccagcgtcagcggacggtggtag

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