Gambusia affinis (western mosquitofish): 122842135
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Entry
122842135 CDS
T07758
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122842135 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122842135 (dis3)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122842135 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
122842135
NCBI-ProteinID:
XP_043991668
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All DBs
Position
LG13:complement(10300218..10310565)
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AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKVVREHYLRDDIWCGSEVCTECKQDSTVLQRDACIESSLCPYP
HYLVPDTNVVLHQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDIIHEQGRHFYTF
TNEHHRETFIEREPGESANDCNDRAIRVAAKWYSQHLKTPESGPDGLKVVLLTNDQSNKL
KAEETGLAVYKFDEYIKSLTGNPELVDCLALSNDDKNEITSSKVLFPEHLPLSKVQAGIK
SGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRAVHQDVVAVQLLPKNQW
VAPSSVVLQDDGAAKDDNVDEDEEEKVLTGPLTETARRATGKVVGIIKRNWRPFCGMLNV
SQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGG
AGEKETEEEVLLLEHDVPHQVFSQAVLSFLPKTPWSITPEDMAQRQDLRHLTVCSVDPPG
CTDIDDALHCRELENGKLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERFAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDANK
NDDITKSLRGLNKLAKILKRKRIENGALTLSSLEVRFHIDSETHDPIDLQTKELMETNSM
VEEFMLLANISVAQKIYDEFPESALLRKHPAPPPSNYDILIKAAKSKNVMIHTDSAKALA
DSLDVAKVDGFQYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFKT
RGIINEEGFVLFVRKNAIIVLIPKFGLEGTVFFNSKDKASPSLVFDEEGPSLKVEQHTFH
IFDQVKVTISLDDSNIQHQKIRMALTEPVIPGVSVPAPEAEPQAKKRKLDR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaagaccttcgttaagaagacccgatcgggtggggtgatgaaggtcgta
cgtgagcattacctgagagatgatatttggtgtggaagtgaagtctgcactgagtgcaaa
caggactccacggtgctgcagagagacgcgtgtattgagagcagtctgtgtccctaccct
cactatctggttcctgacaccaacgtagtgctacatcagattgatgtattggaagatccc
gtgattcgcaacgtgataatccttcagactgttcttcaggaggttcgtcatcgcagtgca
ccggtttataaacgcctgaaggatatcatacatgaacaaggaagacacttctacacattc
accaacgaacaccacagagagacattcatcgaacgtgaaccaggggagagcgccaatgac
tgtaatgatcgggcgatccgtgtggccgccaaatggtatagccagcatctgaaaacgcca
gagtcgggcccagatgggctcaaggtggtcctcctcaccaacgatcaaagcaacaagctg
aaggctgaagagaccggcttggcggtgtacaaatttgatgaatacatcaagagtttgaca
gggaaccctgagttggtggattgcttggctttgtccaacgatgataagaatgagattacc
agcagtaaagtgttgtttccggagcatctccctttgtcgaaggtccaggcaggaatcaag
tctggctcatttctccagggaaccttcagggccagcagggacaactatctggaggccacg
gtttttgtccaaggagagggggaggacagcaccgaggttcttatccagggtcttcagaac
ctcaacagagcagtgcaccaggatgtggttgctgtgcagctgttgccaaagaatcagtgg
gtggcgccgtcgtcagttgtgctgcaggacgatggtgcggcgaaggacgataacgtggat
gaggatgaggaggaaaaagtgctgacgggaccattaactgagacggccaggagggcaaca
ggaaaagtagtgggaatcatcaaaaggaactggaggccattctgtggcatgctcaatgtc
tcccaaatcaaagaatccacccgccatcttttcaccccagcagatcgccgtatcccacgc
attcgcatcgaaacgcgtcaagcctccactcttgcaggtcagaggattatggtggccatt
gatggctggccgaaagactctagatacccaaatggtcattttgtccgcagtctgggaggc
gctggtgagaaggaaaccgaggaggaagtcctgcttctggagcacgatgttccacatcag
gtcttctctcaggccgttctcagttttcttcccaaaacgccgtggagtatcacaccagag
gacatggcacagaggcaggacctgaggcacttaacagtgtgcagtgtggatcctccagga
tgtacagacatagatgatgcgctgcactgcagggagctggaaaacgggaagcttgaggta
ggagttcacatcgctgacgtcagtcactttatcagacctggcaatgctctggacaaagag
gcggctaacagagggaccaccgtgtatttatgtggcaaaagaatagacatggttcctgag
ctgctcagctctaacctttgctctctacggtccaatgtggagaggtttgcgttttcatgt
atttgggagatgaaccacaaagcagaaattttgaagactcggtttacaaaaagcgtcatt
aactccaaggcgtctctcacttacgccgaggcccagatgaggatagatgatgccaacaag
aacgacgacatcactaaaagcttgaggggcctcaacaaactcgcaaagatcctcaaaagg
aagaggatagaaaacggggccctcacgctgtcttccttagaggttcggttccatatagac
agtgaaactcatgacccaattgatctgcagactaaagaactcatggagacaaactccatg
gtggaggagtttatgttgctcgccaatatttcagttgctcagaagatttacgatgaattt
ccagagagcgctctcctgaggaagcatccagctccccctccgtccaactacgacatcctg
atcaaagctgcaaagtccaagaacgtgatgatccacacggattcggccaaagcgctggcc
gattccctggatgtggccaaagtggacggcttccagtatttcaacacgctcctgcgtatc
ttagccactcgctgcatgatgcaagccgtttatttttgttctggcatggacagcgacttc
caccattacggtcttgcctcgcccatttacactcacttcacctccccgattaggaggtac
gctgacatcattgtgcaccgcctgctggcggtggccattggagcagacagcacctaccct
gatctgatggacaaacacaaacagtcggccctctgcaacaacctcaactacagacacaaa
atgtctcagtacgcgcagagagcgtctgtggccttccacactcagttgttcttcaagacc
agaggaattatcaacgaggagggattcgttctgttcgtgcggaagaacgcgatcatcgtt
ctgatcccgaagttcggtctggaaggaaccgttttctttaactccaaagacaaagcttct
cccagcctcgtttttgacgaagagggtccctctctgaaggtggagcagcacactttccac
atatttgaccaggtgaaggtcaccatcagcctggacgactccaacattcagcaccagaag
atccgcatggctctaacagaacctgtgattcctggtgttagtgttcccgcacctgaagcg
gaaccacaagccaagaagcgaaaactggaccgctga
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