Gambusia affinis (western mosquitofish): 122842185
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Entry
122842185 CDS
T07758
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03008
Ribosome biogenesis in eukaryotes
gaf03013
Nucleocytoplasmic transport
gaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122842185 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
122842185 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122842185 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122842185 (xpo1b)
03009 Ribosome biogenesis [BR:
gaf03009
]
122842185 (xpo1b)
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122842185 (xpo1b)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122842185 (xpo1b)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122842185 (xpo1b)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122842185 (xpo1b)
Pre-60S particles
122842185 (xpo1b)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122842185 (xpo1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122842185 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
TPR_TNPO3_IPO13_2nd
BID
BspA_v
Motif
Other DBs
NCBI-GeneID:
122842185
NCBI-ProteinID:
XP_043991755
LinkDB
All DBs
Position
LG13:22690483..22720180
Genome browser
AA seq
1073 aa
AA seq
DB search
MPAVMTILADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGSEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGMGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVP
PLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNF
EEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILY
TMLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKI
TVALNPGGPTNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDF
LVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacaatattagcagaccatgcagcacaacagctgctggacttcaac
cagaaattggatatcaacttgctggataatgtggtgaactgcctatatcatggcgtggga
cctcagcaaagaatggcgcaggaagtgttgacacacttaaaagagcatccagatgcgtgg
acaagagtggacaccatcctggagttctcgcaaaacatgaacaccaaatactatgctctt
cagatactggaaacagttatcaaaacaagatggaagattctgccccgaaatcaatgtgaa
ggtataaaaaagtatgttgttgggctcattattaagacttcatcggatgcttcgagtgta
gagaaagagaaagtgtacattggaaagctgaacatgatcctggttcagatcctgaagcag
gagtggcccaaacactggcccacatttatcagtgacattgtaggcgccagccgcaccagc
gagagcctctgtcagaacaacatggtcatcctgaagctgctcagcgaggaagtctttgac
ttttccagcggacagatgacccaggtcaaggcaaagcacctgaaagacagcatgtgcaat
gagttctcccagattttccagctttgccagtttgtcatggaaaactcccagaatgctcct
ttggtccacgctaccctggagacgctcctgcgtttcctcaactggatcccactgggatac
atctttgaaaccaaactaatcagcacgttggtgtataagttcctgaacgttcccatgttc
cgaaacgtgacgttaaagtgcctgacggagatcgcaggcgtgagcgtgagccagtacgag
gagcagtttgttaccctcttcactctgaccatgtgtcagctcaaacagatgctgccgctg
aacaccaacatccggctggcctacgccaacgggaaagacgacgagcagaacttcatccag
aacctcagcctgtttctgtgcacgttcctcaaagagcacggccagctcatcgagaagcgg
ctcaacctcagagagacactaatggaggcgctccactacatgctcctggtgtcggaggtc
gaagagacggagatctttaaaatttgtctggagtattggaaccatttggctgctgaactt
tacagagagagtccgttctccacgtctacgtcccccctgctctccggcaaccagcacttt
gacgtgccgcctcgcagacagctctatctccccgttctctccaaggtgcgtctcctgatg
gtgagtcggatggctaagccggaggaagtgctggtggtggagaacgaccagggggaggtg
gtccgggagttcatgaaggacacggattccatcaacctctacaagaacatgagggaaacc
ctggtttacctgactcacttggattacgcggacacagagcgcatcatgacggagaagctt
cacaaccaggtgaacgggtctgagtggtcctggaaaaacctcaacacgttgtgctgggcc
atcgggtccatcagcggcgccatgcacgaggaggacgagaagcgattcctcgttactgtc
attaaggatctgttgggtctgtgtgagcagaagagaggaaaagacaacaaggccatcatc
gcttccaacatcatgtacatcgtcggccagtatccccgattcctcagagctcactggaag
ttcctcaaaaccgtcgtaaacaagctgtttgagttcatgcacgagacccacgacggcgtc
caggacatggcgtgcgacaccttcatcaagatagcgcagaagtgcaggcgccacttcatc
caggtccaggtgggcgaggtgatgccgttcatcgacgagatcctgaacaacatcaacacc
atcatctgcgacctccagccgcagcaggttcacacgttttacgaggcggtgggttatatg
atcggagcccagacggaccaggcggtccaggagcatttgatagaaaaatacatgctgctg
cccaatcaggtatgggacagcatcatccagcaggccactaagaacgtcgacatcctgaag
gacccggagacggtgaagcagctgggcagcatcctgaagaccaacgtccgggcctgcaag
gccgtgggtcacccgttcgtcatccagctgggccggatctacctggacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgccgccattcagaccaacggtatgggtgagatg
gtgacgaagcagccgctgatccggagcatgaggacggtgaaacgagagacgctgaaactg
atctcgggctgggtcagccgatcgaacgacccgcagatggtcggagaaaacttcgtgccg
ccgctcctggacgccgtcctcatcgactatcagcgcaacgttccggcggcccgagagccc
gaggttcttagcaccatggcaaccatcgtcaacaagctgggaggtcacattaccagcgag
atcccgcagatcttcgacgccgtgtttgagtgcacgctaaacatgatcaacaagaacttt
gaggagtacccagaacacagaacccacttcttctacttactgcaagcggtgaactcgcac
tgcttcccagcattcctcgccatcccacccgcccagtttaaactggtgctggactccatc
atctgggccttcaaacacaccatgaggaacgtggccgacaccggtctgcagattctctac
acgatgctgcagaacgtggcgcaggaggaagccgcagcgcagagtttctaccagacgtac
ttttgcgacatcctgcagcacattttctccgtggtcaccgacacgtcacacaccgccggt
ctgacgatgcacgcgtccatcctagcctacatgttcaacctggtggaggaagggaagatc
acggtggctctgaaccccggcggtcccaccaacaaccaggtgttcatccaggaatacgtg
gccaacctgctgaagacggcgttcccccacctacaggacgctcaggtgaaggtgtttgtg
acggggctgttcagtttaaaccaggacattcctgcattcaaggagcacctgagggacttc
ctggtgcagataaaggagtttgcaggcgaggacacctcagacctgttcttggaggagagg
gaagcgtcgctccgtcaagcccaggaggagaaacacaagatccagatgtcggtaccgggc
atcctgaacccccacgagatcccggaggagatgtgtgactga
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integrated database retrieval system
