KEGG   Gambusia affinis (western mosquitofish): 122842273
Entry
122842273         CDS       T07758                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122842273 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gaf04990]
    122842273 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:gaf04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   122842273 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ PDZ_6 LIM PDZ_2
Other DBs
NCBI-GeneID: 122842273
NCBI-ProteinID: XP_043991934
LinkDB
Position
LG13:complement(25278502..25296440)
AA seq 321 aa
MPPLRVVMQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCIGDIILSINGDPTES
MTHLEAQNKIKGCVEEMALSIDRSESKLWSPLSSEEGKTHPYRMNLASEPQEVKNIGSSH
NRSALPFAGFGPKVVTNQYNSPSGLYSSDNIKDFNSAVDEVKTVANEPNNKAPLEPAAAG
KRPALPADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDPDKPSGFRSVKAPTTKIG
SSVGNTEKLPVCDKCGSGIVGMVVKLREKFRHPECYTCTACDVNLKQKGHFFVEEQIYCE
QHARERVTPPEGYDVVTVFPK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgcctcctctccgggtggtgatgcagggtcccggcccgtgggggttccgcctcgtcggg
ggtaaggacttcgagcagccgctggctatttcccgggtcaaccctgggagcaaagcggcg
caggccaacttgtgcatcggagacataatcctgtcgatcaatggcgatccgacggagagc
atgactcacctggaggcgcagaacaagataaagggctgcgtcgaggaaatggcgctctcc
atcgacaggtcagaaagtaagctgtggtctccgctctcgtctgaggaaggaaagacgcac
ccttacaggatgaaccttgcgtcagaaccgcaggaggtgaaaaacatcggctcgtcccac
aaccggagcgctctgccgtttgctggttttggcccgaaggtggtgactaaccagtacaac
agtccgtctggtctctactcgtctgacaacatcaaggactttaactccgccgtggacgag
gtgaagacggtggcgaacgagcccaacaacaaagcgccattagagccggcggcggcagga
aagcgaccggcgttgccagcggactcggaggtctacaagatgctccaagagaaccaagag
tccgacgagccgccgcggcagtccgcttccttcaaggtgcttcaggagattctcgagaca
ggcgacccggataaaccgtcaggcttcaggagcgtaaaggcgccaacgacaaagattgga
tcttcagtcgggaacacggagaagttgcccgtctgcgataaatgtggttctgggattgtg
gggatggtggtgaagctgagggaaaagtttcgccaccctgagtgctacacctgcacagcc
tgcgacgtcaacctgaagcagaagggacatttcttcgtggaggagcagatttactgcgag
cagcacgctcgggagcgcgtcactccgccggagggctacgacgtcgtcaccgtcttcccc
aagtag

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