Gambusia affinis (western mosquitofish): 122842273
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Entry
122842273 CDS
T07758
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122842273 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122842273 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122842273 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122842273
NCBI-ProteinID:
XP_043991934
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Position
LG13:complement(25278502..25296440)
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AA seq
321 aa
AA seq
DB search
MPPLRVVMQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCIGDIILSINGDPTES
MTHLEAQNKIKGCVEEMALSIDRSESKLWSPLSSEEGKTHPYRMNLASEPQEVKNIGSSH
NRSALPFAGFGPKVVTNQYNSPSGLYSSDNIKDFNSAVDEVKTVANEPNNKAPLEPAAAG
KRPALPADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDPDKPSGFRSVKAPTTKIG
SSVGNTEKLPVCDKCGSGIVGMVVKLREKFRHPECYTCTACDVNLKQKGHFFVEEQIYCE
QHARERVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctccgggtggtgatgcagggtcccggcccgtgggggttccgcctcgtcggg
ggtaaggacttcgagcagccgctggctatttcccgggtcaaccctgggagcaaagcggcg
caggccaacttgtgcatcggagacataatcctgtcgatcaatggcgatccgacggagagc
atgactcacctggaggcgcagaacaagataaagggctgcgtcgaggaaatggcgctctcc
atcgacaggtcagaaagtaagctgtggtctccgctctcgtctgaggaaggaaagacgcac
ccttacaggatgaaccttgcgtcagaaccgcaggaggtgaaaaacatcggctcgtcccac
aaccggagcgctctgccgtttgctggttttggcccgaaggtggtgactaaccagtacaac
agtccgtctggtctctactcgtctgacaacatcaaggactttaactccgccgtggacgag
gtgaagacggtggcgaacgagcccaacaacaaagcgccattagagccggcggcggcagga
aagcgaccggcgttgccagcggactcggaggtctacaagatgctccaagagaaccaagag
tccgacgagccgccgcggcagtccgcttccttcaaggtgcttcaggagattctcgagaca
ggcgacccggataaaccgtcaggcttcaggagcgtaaaggcgccaacgacaaagattgga
tcttcagtcgggaacacggagaagttgcccgtctgcgataaatgtggttctgggattgtg
gggatggtggtgaagctgagggaaaagtttcgccaccctgagtgctacacctgcacagcc
tgcgacgtcaacctgaagcagaagggacatttcttcgtggaggagcagatttactgcgag
cagcacgctcgggagcgcgtcactccgccggagggctacgacgtcgtcaccgtcttcccc
aagtag
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