KEGG   Gambusia affinis (western mosquitofish): 122842368
Entry
122842368         CDS       T07758                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122842368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gaf03000]
    122842368
   03021 Transcription machinery [BR:gaf03021]
    122842368
Transcription factors [BR:gaf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    122842368
Transcription machinery [BR:gaf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122842368
  RNA polymerase III system
    TFIIIB
     122842368
  RNA polymerase I system
    SL1/TIF-1B
     122842368
SSDB
Motif
Pfam: TBP NUDE_C TFIIA Sporozoite_P67
Other DBs
NCBI-GeneID: 122842368
NCBI-ProteinID: XP_043992100
LinkDB
Position
LG02:12223453..12229141
AA seq 304 aa
MDQNNSIPPFQGLASSPGAMTPGMPMFSPMMPYGSGLTPQPLQNTNSLSILEEQQRQQQQ
QQQQQQQQPSAGLPGTSGQTPQLYHSQTAAGSTTTALPPGTGLYSTSIGPMTPLTPATPA
SESSGIVPTLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEESRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF
RKTT
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaccagaacaacagcataccgcccttccaggggctggcctcctctccgggtgccatg
acccccggcatgccgatgttcagtcccatgatgccttatggctcgggcctgacgccgcag
cctctgcagaacacaaacagcttgtccatcctggaggagcagcagaggcagcagcagcaa
cagcaacagcagcagcagcagcagcccagtgcaggccttccaggaacgtcggggcagacg
cctcagctgtatcattcccagacggcggcgggttcgaccaccacggcgctgccaccaggc
accgggctctacagcacttcgatcggccccatgaccccgctgaccccggctactccggcc
tcggagagctcgggcatcgtgccgacgctgcaaaacatcgtatctactgtaaatctgggc
tgtaaactggatctgaagacgattgccctgagagccaggaatgcagagtacaaccccaaa
cgttttgctgccgtcatcatgagaatacgggagcccaggaccacagcgcttatcttcagc
tctgggaagatggtctgcaccggagctaaaagtgaggaggagtcgcggttagcagccagg
aagtacgctcgcgttgtgcagaaactgggctttcctgccaagttcctggactttaagatt
cagaacatggtgggcagctgcgacgtgaagttccccatccggctggagggattggtgctc
acacaccagcagttcagcagctatgagccggagttgtttccagggttgatctacaggatg
atcaaaccccgaattgtcctgctaatctttgtttctgggaaggtcgttctcacaggagcc
aaggtgagaggagagatctacgaagcgtttgaaaacatttaccccatcctgaaaggtttc
cgtaaaactacgtag

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