Gambusia affinis (western mosquitofish): 122842368
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Entry
122842368 CDS
T07758
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122842368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122842368
03021 Transcription machinery [BR:
gaf03021
]
122842368
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
122842368
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122842368
RNA polymerase III system
TFIIIB
122842368
RNA polymerase I system
SL1/TIF-1B
122842368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
NUDE_C
TFIIA
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
122842368
NCBI-ProteinID:
XP_043992100
LinkDB
All DBs
Position
LG02:12223453..12229141
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AA seq
304 aa
AA seq
DB search
MDQNNSIPPFQGLASSPGAMTPGMPMFSPMMPYGSGLTPQPLQNTNSLSILEEQQRQQQQ
QQQQQQQQPSAGLPGTSGQTPQLYHSQTAAGSTTTALPPGTGLYSTSIGPMTPLTPATPA
SESSGIVPTLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEESRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF
RKTT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagcataccgcccttccaggggctggcctcctctccgggtgccatg
acccccggcatgccgatgttcagtcccatgatgccttatggctcgggcctgacgccgcag
cctctgcagaacacaaacagcttgtccatcctggaggagcagcagaggcagcagcagcaa
cagcaacagcagcagcagcagcagcccagtgcaggccttccaggaacgtcggggcagacg
cctcagctgtatcattcccagacggcggcgggttcgaccaccacggcgctgccaccaggc
accgggctctacagcacttcgatcggccccatgaccccgctgaccccggctactccggcc
tcggagagctcgggcatcgtgccgacgctgcaaaacatcgtatctactgtaaatctgggc
tgtaaactggatctgaagacgattgccctgagagccaggaatgcagagtacaaccccaaa
cgttttgctgccgtcatcatgagaatacgggagcccaggaccacagcgcttatcttcagc
tctgggaagatggtctgcaccggagctaaaagtgaggaggagtcgcggttagcagccagg
aagtacgctcgcgttgtgcagaaactgggctttcctgccaagttcctggactttaagatt
cagaacatggtgggcagctgcgacgtgaagttccccatccggctggagggattggtgctc
acacaccagcagttcagcagctatgagccggagttgtttccagggttgatctacaggatg
atcaaaccccgaattgtcctgctaatctttgtttctgggaaggtcgttctcacaggagcc
aaggtgagaggagagatctacgaagcgtttgaaaacatttaccccatcctgaaaggtttc
cgtaaaactacgtag
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integrated database retrieval system