Gambusia affinis (western mosquitofish): 122842381
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Entry
122842381 CDS
T07758
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gaf03037
]
122842381
Cilium and associated proteins [BR:
gaf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122842381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
HOOK
CCDC110
KASH_CCD
CHD5
DUF4472
CCDC160
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
122842381
NCBI-ProteinID:
XP_043992116
LinkDB
All DBs
Position
LG13:7146553..7208461
Genome browser
AA seq
2032 aa
AA seq
DB search
MENEVFTPLLEQFMLTPLVCWVKSVGHSTVTDGSKLSEYIELVDGIYLNEIMFEINPKAT
VQRTNKKVNNDPTLRIQNLSIIIRQIKAYYQESLQQLVMMPLPNVLVLGRNPLSEQGLEE
MRKMLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLESGE
MPPEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLAPIATQSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELKRIQQESYQLLS
DARSARAYRDELDALREKAIRVDKLESELCRYKERLHDIDFYKARVEELKEDNQILLETK
TMLEEQLDSTRTRSDKLHLLEKENLQLKSKMHDLEMERDLDRKRMEELLEENLVLEMAQK
QSMDESLHLGWELEQLSKTPELTDAPQKSLGEEVNELTSSRLLKLEKENQALLKKVEELK
GTASQDNTAKLTKANQENQKLTQKLERLENELMVDRESLRSAESLSTDLMKEKALLEKTL
ETLRENSERQMKGLEQENKHLSQTISSLRQRCQVGAEARVKDVEKENRVLHESICETTGK
LNKLEFERKQLRKELELMKEKGERAEELEVRLQKLERENESLQKKVATLGITCEKVSSLE
KENSELEVEGRRLKKKLDGLKNMAFQLEALEKENGQLEQENLELRRSTETLRSAGAKAAQ
LEAENRELESERTQLKRSLELHKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL
EAELQEVETENQTLQRNLEELKISSKRLEQLEQENKTLELESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDGNQRIAALEKENRTMGKEMIFFRDSCTRVKDLEKENKELVKQGSIDKK
TLMTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVHSSPPKG
GENSQTVSKWEKESHEATRELLKVKDRLIEVERNNATLQAEKVALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSQSAALMAQNAQLQSQQSSVEGERE
GALREKEELRATYELLLRDHEKLAALHERQAAEYEALIGKHGGLKTSHKSLEQQHRDLED
KYKQLLQRKGELEELEKNLKEQQDKMAQENQSHQATADQCKLLKEENDRMNTAYRQLMKD
NESLQVDHKNIKSQLNSAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFFDPSPPRRRGNWITLKMKKLIKPRSRERMRSLTLTPSRSELGESVFTFVPDSQDSSS
IGSGSNSLDDALTQKRSMRRRGQHSHAQSQGSSNALKRLPFMRNRSKDKDKDKAIYRRSM
SMNDLLQTMAVAGVSGSQWAGSTENLDGPEGGDGSMTGSSRRSGQRMKELALSTNAIDCA
ALTLPSARRAKLHLQVKDNASCEDVAGSLDDPKSQGRQGSSGALALCRPVELKAMCRVPC
SICTSRPSSLHSNKTSSNSNNNSHLTSPLEGKGTLNGSLSRPQSESSGEFSLSLDQEVWS
SSGSSPVQQPTSLRSSHQSPLQLRRSLEPSGTAAVSAQAQIRKMGSPSEVLSLQQFLDEG
IDPAESGSQENLTVDSPRLSTSTEHAQKDRASTKARGILRSSSGRAAPTSAERALRSSGQ
PGRPSLRKAESTRVKGSAPLRSSLSSQGKATSVSERLDSSSSSSSTLPRASSVISTAEGT
TRRTSIHDLLSKDHRQPVSVDASPHAPSPKAGVRSQPTPSEYHPNIASPMPKSVSLPCHS
SEDPDLDSLESFLGPSFTAESVFMDSIFSESAENLPFLSLNPTLVSNISGPPAQPRPGPN
QSPHSQSNGPMRASSSRLTAYDDGIDPSSVTETEQTLSPEDSQSLWYEYGCV
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaggttttcaccccgctgctggagcagttcatgctaacgcctctggtctgc
tgggtaaagagtgttgggcactcgacagtgaccgatggcagtaaattgtcggaatacatc
gagttggtggatgggatttacctgaacgagatcatgtttgagataaatccaaaagctaca
gtgcagaggaccaacaagaaagtaaacaatgaccccacactgcgcattcagaacctttct
attatcatcaggcagattaaagcttactatcaggagagtctccagcagttggtgatgatg
cctttgccaaacgtcctggttctgggccggaacccactttctgaacaaggcctggaggag
atgagaaaaatgttgctgctgcttttaggatgtgctgttcagtgcgagaagaaagaagaa
tacatcgaacgtatccagactctggattttgacaccaaagccgcaatagcgtctcacatt
caagaggtcacccataaccaggagaatgtggtggacctgcagtggttggagagtggagaa
atgccccctgaggatttggacagcctgtcgagaaatctggctttccacctcaaacgtctg
gtggatgaaagggacacacagctggagacgatcgtggagctcacccaggagagagactgt
gtgcagctctctcccctggctcccatcgccacccagtctcctggtgactctcccagcatg
aggaggactgagagtcgacagcacctctcggtggagttggccgatgccaaggccaaaatc
agacgccttcgacaggaactggaggaaaaaagcgagcagcttctggacaccaggcaggag
ctggagaacatggaggtggagctgaagagaatccagcaggagagctaccagctgctgtcc
gacgctcgctcggctcgggcctaccgcgatgagctggacgcactccgagaaaaagccata
cgtgtcgacaaactggagagcgagctctgccggtacaaggagagacttcatgacattgac
ttctacaaggccagagtcgaggagctaaaggaggacaaccagattttgctagaaacaaag
acaatgttggaggagcagctggattccaccaggacgcggtccgacaaactacaccttctg
gagaaagagaacctccagctcaagtccaagatgcacgatctggagatggagcgggacctt
gaccggaagcgaatggaggagctgctagaggagaacctcgtgttggagatggcccagaaa
cagagcatggacgagtcgctgcacctgggctgggagctggagcaattatcaaagacacca
gagctgactgatgctccgcagaagtctctgggcgaggaggtgaatgaactgacctccagt
cgcctgttaaagctggagaaagaaaatcaagctctgctgaagaaggtggaggaactcaaa
ggaacagccagtcaggacaacacagctaaactgaccaaagccaaccaagaaaaccagaag
cttacccagaaattggagcgactggagaatgaactaatggtggatagggagtcgctccgt
agtgccgagtcactgagtacggacctgatgaaggaaaaggctttgttggagaagactctg
gagacactcagggaaaactcagagagacagatgaagggcctggagcaggagaacaagcac
ctgagccaaaccatttcctcgctgcgtcaacgctgccaggttggagccgaggcccgcgtg
aaagacgtggagaaggagaacagagttcttcacgagtcaatctgcgagaccacgggcaaa
ctgaacaagctggaatttgaaaggaagcagctacgaaaggagcttgaattgatgaaggag
aaaggtgagagagcagaagagttggaggttcggctgcagaagctggaaagagaaaatgaa
agcctgcagaagaaagttgccactcttggaattacctgtgagaaggtttcttctttggag
aaggagaactctgagttggaggtggagggccgccgtctaaagaaaaaactggacggcctg
aaaaacatggctttccagttggaggcgctggaaaaagagaacggccagctggaacaggag
aacctggagctccggcgctcaaccgagacgctccggtcagcgggggcaaaggccgctcag
ctggaagccgagaaccgggagctggaaagcgagaggacccagctgaagcgcagcttggaa
ctgcataaagcctcgtctaagaagacggaaagattagaggtgagctaccaaggtctggac
acagagaaccagcggcttcagaaggctttggagaacagcagcaagaagatccagcagctg
gaggcagaattgcaagaggtggagactgagaatcaaacccttcagcgtaacctggaggaa
ctgaagatctcgagtaaacggctggagcagctggagcaggagaacaaaactctggagctg
gaaagctcccagctggagaaagataagaagcttctggagaaggagaacaagcggctgagg
cagcaggccgagatccgcgactccaagctggatgacggcaatcagcggatcgccgccctg
gagaaggagaaccgcaccatgggcaaggagatgatcttcttcagggactcgtgtacgaga
gtcaaggacctggagaaagagaacaaggagctggtcaaacagggcagtatagataagaag
accctgatgacactaagagaggagcttgtgagtgagaaactgcggacgcagcagatgaat
aatgaccttgagaaacttactcatgaattggagaaaattggactgaacaaagagagactc
ctgcatgatgagagctccgatgacaggtttaagctgcttgaaaccaagctggagtcaact
ctgaaatcatctttggagatcaaggaggagaaaatcgctgctttagaggcgcgattacag
gaatcctccaacctcaaccagcaacttcggcaggagctaaaaacggtaaagaaaaactat
gaggcgcttcgccagagagaggaggaggaaaggatggtgcacagctctcccccgaaagga
ggggaaaactcccagactgtcagtaaatgggaaaaggagagtcatgaagccaccagggag
ctgctgaaagtcaaagacagactaattgaagtggagagaaacaatgctacgctgcaggct
gagaaagtggctctgagaagccaactcaaacaactggaaactcagagctccaacctgcag
gcgcagattgtagcggtgcagaggcagaccgcctccctacaggagaacaacaccactctg
cagacacagaatgccaaactgcaggtggagaactccaccctgagttctcaaagtgcggcc
ctcatggcccagaatgcccagctgcagagccagcagagcagcgtggagggagaacgggag
ggagcgctgagagagaaggaggagctgagggcgacctacgagctgctgctccgggatcac
gagaagctggcggcgctccacgagcggcaggcggccgagtatgaagctctgattgggaag
cacggcggcctgaagacctcccacaagagcctggagcaacagcacagagacttggaggac
aagtacaagcagctcctgcagagaaagggtgagctggaggagttggagaaaaacctgaag
gagcaacaggacaagatggcacaggagaatcagagccaccaagccacagctgaccagtgc
aaactgctcaaagaggaaaacgacaggatgaacacagcctatcgccagctgatgaaggac
aacgagagtctgcaggtggaccataagaacatcaagagccagctgaacagtgcaaagctg
gagcagaccaagctagaagccgagttctccaaactcaaggagcaataccagcagctggac
atcacctccactaaactcaccaaccagtgtgagttgttgagccagctgaaaggcaacttg
gaggaggagaaccgtcacctgttggaccagatccagaccttgatgctgcagaaccgcaca
cttctggagcagacgatggagagcaaggacctgttccatgtagagcaaagacaatacata
gacaagctaaacgagttgagaagacagaaggaaaaactcgaggagaaaataatggaccag
tacaaattctttgatccttcgcctccacgcaggcgtggcaactggatcactctgaagatg
aagaagctgatcaagccaaggagccgggagaggatgcggtctctcacgctgaccccctct
cgttcggagctgggggaaagtgttttcacttttgttccggacagccaggacagctcctcc
atcggctctgggtccaactcgctggacgacgcgctcacacaaaagaggagcatgagaagg
agagggcagcattcccatgcccaaagtcagggttcgtccaatgctctaaagaggttgcct
ttcatgaggaacagatccaaggacaaagacaaagacaaggccatctaccgacgctcgatg
tccatgaacgacttgctgcagacgatggcagtggccggtgtttcagggtcacagtgggcg
ggcagcacggagaatctcgacggacctgaaggaggagacggcagcatgacgggcagcagc
aggcgcagcggacagcgcatgaaggagctggctctgtccaccaacgccatcgactgcgct
gcactaacgcttccgtctgcgaggcgggctaagctccaccttcaggtcaaagacaatgcc
tcctgtgaggatgttgctggttccttagatgaccctaagagtcaaggccggcaggggtct
agcggtgctcttgctttgtgtcgtcctgttgagctgaaggctatgtgcagagtgccctgt
agcatctgtacctccagaccctccagccttcatagcaacaagacaagtagcaatagtaac
aataactcacacctcacctctcctctggagggcaaaggcacgctgaatggcagtcttagc
aggcctcagagtgagagcagcggggagttcagcttgagcctggaccaggaggtgtggtcc
agtagcggcagcagccccgtccagcagcccacctccttgcgctcctcccaccagagcccc
ctgcagctgcgcaggtccctggagccgtccggcaccgccgccgtctccgctcaggcacag
atcaggaagatgggctcccccagcgaggttctgtccctgcagcagttcctagatgagggt
attgatcctgcagagtctggcagtcaggagaacctcacggtggattcccctcgcctctcc
acttctactgagcacgctcagaaagatcgcgcctccaccaaagcgcggggcattttacgc
tccagcagtgggagagcggcgccgaccagcgccgagcgggctctgaggtcctcgggacag
cccggccggccaagcctgcggaaagccgagagcacgcgcgtcaaaggctccgcccctctc
cgctccagcctctcctcgcaggggaaagccacgtccgtctccgagcgcctggactcctcc
tcctcctcctcctccacactgccccgggccagcagcgtcatctcgacagccgaaggtacc
acaaggcgcaccagcatccatgacctactgtccaaagaccaccggcagcccgtgtctgtt
gacgcctctcctcacgccccctccccaaaggctggcgtacgctcgcagccgacacccagt
gagtaccaccccaacatcgcctcccccatgcccaaatcagtcagcctaccctgccacagc
tcagaggaccccgacctcgacagcctcgagtctttcctcggcccctccttcaccgcagag
tcagtgttcatggactccatctttagcgagtcagcagaaaatctccccttcctgtccctg
aaccccaccctagtcagcaacatcagcggccccccagcccagcctcgccctgggccgaac
cagagcccacacagccagtccaatggcccgatgagggccagctcatcccgcctgacggcg
tacgatgatggtattgatccaagtagcgtcactgagacagagcagactctgagcccagag
gacagccagtctctgtggtacgagtacggctgtgtttga
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