Gambusia affinis (western mosquitofish): 122842416
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Entry
122842416 CDS
T07758
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122842416 (rin2a)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122842416 (rin2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
Lpg0393_VPS9
RA_2
SH2
FERM_f0
TUG-UBL1
IL6
Motif
Other DBs
NCBI-GeneID:
122842416
NCBI-ProteinID:
XP_043992175
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All DBs
Position
LG13:4693112..4722212
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AA seq
1080 aa
AA seq
DB search
MTAQRQRDSMSISPSCETKGSFFKLIDSIVWEIGTLKKEMGRKTETAEDNRETDAHVGLS
EEVGRLFLQASPCPGMGAGPTKARDSGYDSLHRRLSVLEKLMHTHSVWLQLGLSHQDAAG
ILQSQPAGSFLVRRSTSLQKKVISLRMDKDSAEPIKDFAVKESLYTFSLEGSELSFADLF
RLLAFCCISRDVLPFTLKLPEAISSARSFADLEEAAKLGAGFWDSKLCRRAVSVSLPKTA
GPDRPPPPAPRPLSCPSTPTCPELRIRSPTQLDCCLPNGALGFINPLFVKVHQPDGGNQL
SSARTVNQLLRNESNNNISPTNRSERDSCLERPQTYSSDLGDQSQRPQENLGSITTSACS
TGQTGSSQALGASPPRPPRPPPPRLPRHLLAPPIQQQSMPEKVAWINIPKEEEKEKSSNL
FSRLSSSLSISPSSSPPKRLSISSPISIPRRTLPLPLTAFSSSPRRSKASPSSSHEDAQC
HLALEDQTIEKAILRTKLSKQKSSHSTGQGACSASEPSVMTGSKLSEVTPGEASQEDCTN
GGQRLSDMSLSTDSSDSLDYSQSSAFFIPPLHDPSPPTVADFNTHLPLSIPPSHLRYSSV
NMDDDVDDDDDEEEEPDYGVSLESEQDQDLTMLPPGVHTKRRPSASALVLQKALQGKFRK
MSGVFNSLLTPEKRAIRKVLEMSKDKNSYFGSLVQDYLSYMGEGAGAQAWQGYTSGLELL
QTIRQFITQMKSYLRQTSEMEPPIESLIPEDQIDRVLEKAMLKCVLKPLKLPISAALKEF
QVRSGSWQELRENLSLAKARRPQEMGVADTLPPDPVAIEKIRQKFHTMCKLYSPEKKVCM
LLRVCKLIYTIMEDNSGRLYGADDFLPMLTYVLAQCDMPELDNEILYMMELLDPSLLHGE
GGYYLTSAYGAMSLVKNFQEDQAARVLSSETRNTLHQWHRRRTTQRSAPSVDDFQNFLRV
ALQEVDSGCTAKTLPVRPYTTVEELCQLCALKFKVSDPKNYGLFLQMEGSTQQLAADTHP
QKIKAELHSRPQPVPFHFVYRRLAINGTLSASLSSTPADLSCLAVAPDPQANLGGGSISV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcagcgacaaagagacagcatgtcgatcagtccatcttgtgagacgaagggc
agtttcttcaagctgattgactcgatcgtctgggagatcggcacactgaagaaggagatg
gggagaaagacagagactgcggaagacaacagggaaactgatgcacatgttgggctgagc
gaagaagtgggacgtctatttcttcaagcctcaccttgtcctgggatgggagccggaccg
accaaagcaagagattcaggctatgactctctccaccgtcggctcagtgttctggagaaa
ctgatgcacacacattctgtgtggctgcagctgggcctcagccaccaggatgcagctgga
atactgcagagccagcctgctgggtcattcctggtgagacggtccaccagcctgcagaag
aaagttatttctctacgcatggacaaggactctgcagaacccatcaaagactttgcagtc
aaagagagtctgtacacattctctctggagggatcagagctgagctttgcagaccttttt
cgcctcttggctttctgctgcatcagcagggatgtgctgcccttcacgctgaagcttcca
gaggccatctcttctgccagaagttttgcagatcttgaggaggctgctaaactcggagca
ggcttttgggacagtaagttgtgcaggagagcagtatccgtatctctgccaaagacggca
ggtcctgatagaccacctccaccggctccgagaccgctctcctgtccatctacccctaca
tgtcccgagcttcgaattcgcagccccactcagctggactgttgcctgcctaacggcgca
ctgggcttcatcaaccccctttttgtaaaggttcatcagccagatggtggcaaccagctc
agctctgccagaactgtaaaccagttacttagaaatgagtccaacaacaatataagtccc
accaataggagcgagagagactcgtgtttggaaagacctcagacgtacagctcagacctc
ggtgaccagagccagcgacctcaagagaacttagggagtataaccacaagtgcatgcagt
acaggacaaactggtagcagccaggcgttgggtgcctctccaccccgccctcctcgaccg
ccacccccccgtcttcccagacacctgcttgcgcctcctatccaacagcaaagcatgcca
gaaaaagtcgcctggattaacattccgaaggaggaagagaaggagaagagcagcaacctc
ttttcacgcctcagctcctcgttgagcatcagtccatcgtcctcgcctccgaagagactt
agcatcagctccccgatatccattccccggcgaaccctgcccctccctctgacggctttc
tcctcctctccacgtcgatccaaagcatctccttcatccagtcatgaggatgctcagtgc
catctggcgctggaggatcagacgattgagaaggccatcctaaggaccaaactgtcaaag
caaaagtcatctcattctacaggccagggcgcctgcagtgcttcagagccttcggtgatg
acaggaagcaagctttcagaagtcacacctggagaagcatctcaggaggactgtaccaat
ggcggccaacgactgagtgacatgagcctctccacagattcctcggattccctagattac
tcccagtcctctgccttcttcattcctccactgcatgatcccagcccccccactgtcgct
gacttcaacacccatctcccgctctccatcccaccatcccacctacgttacagcagcgtc
aatatggacgacgacgttgatgacgacgacgatgaagaagaagaacctgactacggcgtt
agcctcgagagtgagcaagaccaagatctgactatgctcccacccggggtccacacaaag
cggcgccccagtgccagcgccttggtcctgcagaaagccctgcaggggaaatttcggaag
atgagcggcgttttcaactcgctgctgacgccagagaagagggcaatccgcaaagtcctg
gagatgtccaaggataagaactcatactttggctccctggtgcaggactatctgagctac
atgggggagggtgctggcgcccaggcctggcagggctacacctcaggactcgagctgctt
cagaccatccgccagtttatcactcagatgaagagctatctgcggcaaacctctgagatg
gagccacctattgagagcctcattcctgaagatcagattgacagagtcctggaaaaggcc
atgctgaagtgcgttctgaagccgctgaagctgcctatcagcgcagcgctaaaggagttc
caggtgcgcagcggcagctggcaggagctgagagagaacctgtcattggccaaggcccgg
cgacctcaggagatgggcgtggccgacactctgcctcccgaccccgtggctatagaaaag
atcaggcagaagttccacaccatgtgcaagctgtactccccagagaagaaagtctgcatg
ctgctaagagtctgcaagctaatttacaccatcatggaagacaactcaggtcgtttgtat
ggagccgatgacttcctccccatgctgacctatgtgctggcccagtgtgacatgcctgag
ctggacaatgagatcctgtacatgatggagctgcttgacccctcgctgctgcatggggaa
ggtggttactatctgaccagcgcctatggagccatgtccctggttaagaacttccaggag
gatcaggcagccagggtgctgagctctgaaaccagaaacacgctacaccagtggcaccgg
cggcgcaccacccaacgttctgcaccttccgtggatgacttccagaacttcctgcgtgtg
gcactgcaggaggtggacagcggctgcacggctaagactctgccagtgcgaccgtacacc
acggtggaggaattgtgccagctgtgcgccctgaagtttaaggtgtcggaccccaagaac
tacggcctgttcctgcagatggagggcagcacccagcagctggcagcagacacccaccct
cagaagatcaaagctgagcttcacagccgcccacagccggttcccttccactttgtctac
cgtcgtttggccataaacggaacgttgtcagcatctctctccagcacccctgccgacctc
agttgtctcgccgtggcccctgatccccaggccaacctcggcggcggctccatctctgta
tga
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