Gambusia affinis (western mosquitofish): 122842417
Help
Entry
122842417 CDS
T07758
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122842417 (hps1)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
122842417 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
122842417
NCBI-ProteinID:
XP_043992180
LinkDB
All DBs
Position
LG13:14672029..14679178
Genome browser
AA seq
676 aa
AA seq
DB search
MKCLLIASESAEVLFHWSDREYRQNIQEKYGVSQEEGEGLPAFEDILSTLFAPIIISCST
LEDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEKEDDLRRKLYVLKKMVEVMFGMVTL
SGNLLRRELRPQDTEQRARLWKYLQSLLETYSLLRENDQSFLVEAVERLIHPQLCELCIE
FLERRLVQQLNSSVERAGEEVLHAFVLVHTKLLAFYSSRNASILSPSDLLALIVMAQNMY
PSNVDLDDMSPEDTESTSGSGPENFYTPEPSPSSRSSSSSGKAGRGETPVFEFVDPEIQM
AEDSLHTLEINPPDPASPRRVFLEVSHKDGPFPMMPHSMYCLSLWPGITLVLLTKISSSA
LAISVYKYLEEFDKLEKRLHEGHGGPASARSPLNMQDIRSKMDKFIKSLEPHDLQYAQLQ
NVWAEFKSRAFSRGGSGFNKDLIPWCKNMKTQLCGIYRQCFLTGSLSADVTHRLSAGLQE
RAQAMVREKLVDWKDFLLVKSKRNITMVSYLEDFPGLVHFICVDRATGQMIAPSLNITER
TTSELGKGPVAKYIKNKVWALVRTTRSYLQKGYSTVTLRDGDFYFCYFLWFENETGYKLQ
PVEIPVLPDDSPPIGMLAYDYYNRLLRYCSKSHKGENVKCYELLTVHLGVIPTEIILQHC
RQLASKLWEPSRNPLL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgttgatagccagcgagagcgccgaggtcctcttccactggagtgaccgc
gaatatcgccagaatatccaggagaagtatggggtctctcaggaggaaggcgaggggctt
cctgcctttgaagacatcttgagcactttgtttgctcccatcattatctcctgcagcacc
ttggaggacagctacacctccttcaccactgagaacaaccacatctacgtcctacaccag
ttcgacgagtgtctctacatcgccgtgaacggggacggcgaagaaaaggaggacgacctg
aggagaaaattgtacgtgctgaaaaagatggtggaggtcatgttcggcatggtcacgctc
agtgggaacctcctgaggagagaactgcggcctcaggacacggagcagagagcgaggctc
tggaagtatctgcagagcctgctggagacctacagcctcctccgggagaacgaccagagc
ttcttagtggaggcggtggagcgcttgattcacccgcagctctgtgagctgtgcatagag
ttcctggagcgccgcctggtccagcagctcaacagcagtgtggagcgagcaggagaggag
gttctgcacgccttcgtcctcgttcacaccaagctgctcgctttctactccagccgcaat
gccagcatcctctccccctcagacctgctggccctcatcgtcatggcacaaaatatgtat
cccagcaatgtagatctggacgacatgagtccagaggatactgagagcacatccggttct
ggccctgaaaatttctatacaccagaaccttccccctccagtagaagctccagtagctca
gggaaagctggccgaggagaaactcctgtgtttgagtttgtggacccagaaatccagatg
gcagaggacagcttgcacactctggaaattaacccaccggaccctgcgagccctcggaga
gttttcctcgaggtatcacacaaagatgggccatttcccatgatgcctcactccatgtac
tgcctctcactgtggccaggcatcacactagtgctgctcaccaagatttcctccagtgca
ctggccatctcggtgtataagtacttggaggaatttgacaagctggagaaacgattacac
gaaggccatggaggtcccgcctcagccagaagtcctctgaatatgcaggacatccgctcc
aaaatggacaaattcatcaaatctttggagccccatgacttacagtatgcgcagttacaa
aatgtctgggcagagttcaagagccgagccttttccagaggaggttctggtttcaacaaa
gatctcatcccgtggtgtaagaacatgaagacgcagttgtgtggaatatacagacagtgt
ttcctgactggttctttgtctgctgatgttactcatcgtctctctgctggtctgcaggaa
cgagcccaggctatggttcgagagaaactggtggactggaaggacttcctgttggtcaaa
agcaaaaggaacataaccatggtgtcttatctggaggatttcccaggcctcgtccatttt
atctgcgtggaccgagcaactggccaaatgattgctccatcactcaacatcacagagcgc
actacgtcagagctggggaagggacctgtggctaaatatattaaaaacaaggtatgggcc
ctggtcaggacaacccgcagctatctgcagaagggttattccaccgtcacactccgtgat
ggagatttctatttctgctacttcctctggtttgagaatgaaacgggatacaagttacag
ccagtggagataccagtgctacctgacgactctccacccattgggatgctcgcctatgac
tactacaataggctgctgaggtactgcagcaagagccacaagggggagaatgtgaagtgc
tatgagctgctgactgtccacctgggggtcatccctacagaaatcatcctccagcactgc
aggcaactcgcaagcaaactgtgggaaccctcacgcaatccgctgctgtag
DBGET
integrated database retrieval system
