Gambusia affinis (western mosquitofish): 122842575
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Entry
122842575 CDS
T07758
Symbol
atrnl1a
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gaf04091
]
122842575 (atrnl1a)
Lectins [BR:
gaf04091
]
C-Type lectins
Others
122842575 (atrnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_4
Kelch_5
Kelch_6
EGF_LMN_ATRN
CUB
Kelch_2
EGF_TEN
PSI
NANM
EGF_Teneurin
TMEM100
EGF_laminin
EGF_2
Motif
Other DBs
NCBI-GeneID:
122842575
NCBI-ProteinID:
XP_043992503
LinkDB
All DBs
Position
LG13:634436..886106
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AA seq
1448 aa
AA seq
DB search
MDPSGCKHLPAWARSSSGLWKTYLGLLVLLHLVLHAGTSSAPCDKSCFSGKCVNGSCVCD
HGWVGDQCQHCQGRFKLTDLSGSLSDGPVNYKYKTKCSWLIEGYPNAALRLRFNHFATEC
SWDHMYVYDGDSIYAPLIAVFSGLVVPEVKGKESVPEVVTTSGYALLHFFSDAAYNLTGF
NIAYSINSCPNNCSGHGRCSAGNSVAGRVYCECDEYWKGEACAVPYCRDDCGSPDHGYCD
LTGEKLCVCNDSWQGPDCTIPVPSMGAFWMLPSIKPSAQSLGRASHRALVHSGLMWVVGG
YSFNYSNYHMMLNYNPDTSAWDVVPASNGPLYRYGHSLALYQDCIYMFGGKLETGPANIT
DELWLFNIPTRSWLPLKPASAPLYALEGHTAHVVILPNGDPVMLVFFGYSPIYSYINKVQ
EYNIRSNLWQVVSVGGAVVQGGYGHSSVYDQASGCVYVHGGYTALSHNKYGLVDHMYRYS
VATRTWLILRESGLPRYLHSAVLLSGTMLVFGGNTHNDTSLSNGAKCFSADFLAYDIACD
KWTVLPRPGLHRDVNRFGHSAVVSNGSMYIFGGFSGLLLNDVLAYNPPSCQAFLSPTLCS
AAGPGVRCFWVKNRCLPWESKKHDHIVPTSFCPTRPDSTDEQCIHFSDCASCTANTRGCQ
WCEDRKCIAASSNCTVLTLELALQHGGALSLSPPPSMLSEHQLSLWKHGARRRGHSVRDP
SRCKRREEQECFRLTNCRSCSLNSNCQWEVQQQECQVLPGQLCGDGWYHVGDVCLRINSS
RESYDNAQHYCKNLGGNIASLLTDNQIGFVLEELHKYELENQRLSPWVGLRKINVSYWGW
EDASPFTNSTLQWLPGEPSDSGFCAFLERTESAGLKANPCTATTDGLICEKAAGSLHSQN
ARPCKTPCALRTSCANCTSQAMECMWCGSTQQCVDSSAYIISFPYGQCMEWQTQECSAQN
CLGHRTCAECLERVECGWCGDPSNTGRGVCMEGSYRGPLKPSSTRSGSRLRDRDMVVDQS
LCSSDRGYNWAFIECPACQCNGHSRCVNSSVCEHCGNLTAGTHCQACIPGYYGDPTNGGK
CNVCKCNNHANLCHVSSGKCFCTTKGIKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQF
TFSLLQEDDRHYTAINFMATPEQANKNLDMSINASNNFNLNITWSFSSTAGTISGEEMSV
IARTNIKEHRDSFSCEKFNFRLHHNITFYIYVSNFSWPIKIQIAFSQHNTIMDLVQFFVT
FFSCFLSLLLVAAVVWKIKQTCWASRRRERDEVRALADQRKLNEDFTFQQLMRERQQMAS
RPFASVAVALEVGGNQEELQQVCLGPVESGSLWSNFPYLCFSLVSISLWKAVPKLFAMEP
CWGSRAGVLTVLLHLPRLPSGIPPPGQSGIAIASALVDTSQQRVVDSKERGLGLKHRKHI
VHHQGTCV
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctggatgtaaacatctaccagcctgggccaggtcatcatctgggctgtgg
aaaacatatctgggattactggtgctgcttcatctggtgctccacgccgggacttcgtcg
gcgccctgcgataagagctgtttttcagggaagtgtgtcaacgggagctgcgtgtgtgac
cacggctgggtcggggatcagtgtcagcactgccagggaagattcaagttaacagatctg
tcaggttctctctcagatggtccagttaactacaagtacaagaccaaatgcagttggcta
attgaaggataccctaatgcggcgctccggctgcgcttcaatcactttgccaccgagtgc
agctgggaccacatgtatgtctacgatggcgactccatttatgctcccttgattgctgtg
ttcagtggtttggtggtgccggaggtgaaagggaaggagtcggtacccgaggtagtgacg
acgtccgggtatgccctgctccacttcttcagcgacgccgcatacaacttgactggtttc
aacattgcctactcgataaactcctgtcccaacaactgttcgggccacggccggtgcagc
gcagggaattcagtggcgggccgcgtttattgtgaatgtgatgagtactggaaaggtgag
gcctgcgccgttccgtactgcagggatgactgtggcagcccggaccacggctactgcgac
ctgaccggagaaaagctctgtgtctgcaacgacagctggcaaggtcctgactgcaccatc
cctgtcccctccatgggggccttctggatgctgcccagcatcaaaccgtcggctcagtcc
ctgggccgggcctcccaccgagccctggtgcattctgggttgatgtgggtggttggaggc
tactccttcaactactctaactaccacatgatgctcaactacaacccggacaccagcgcg
tgggacgtggtgccagccagcaacggacccctctacagatatggacactctctggctctc
taccaggattgtatctatatgttcggtggaaagctggagacaggccctgctaacatcaca
gacgagttgtggttgttcaacatccccactcgtagctggttgccactgaaaccagcttca
gcacctctttatgccctggagggccacacggctcacgtggtcatcctgcctaatggcgac
ccagtgatgctggtcttctttggctactctcccatctacagctacatcaacaaagttcag
gagtacaacatcaggtcaaacttgtggcaggttgtgtctgttggaggcgccgtggttcag
ggaggttatggccacagcagtgtgtatgaccaggccagtggctgtgtgtatgtccatggg
ggatacacggcgctgagccacaataaatacggccttgtggaccacatgtaccgctacagc
gtcgctaccagaacatggttgattctcagggagagcgggttgccgcggtacctccactcc
gcggtgctgttgagtggcacaatgctggtgtttggaggaaacactcacaatgacacatcg
ctaagtaatggagccaagtgcttttctgctgacttcttggcatatgatatagcttgtgat
aaatggacggtccttcctagaccaggactccacagagacgtcaaccgcttcggacactct
gctgtggtcagcaatggctccatgtacatcttcggaggcttttcgggtctgcttctgaat
gatgtgctggcctacaaccctccatcctgccaagccttcttgtccccaactctgtgttcg
gcagctgggccgggagttcgctgcttctgggtgaaaaacagatgtctcccatgggagtcc
aaaaagcacgatcatattgtcccgacatctttctgccccacacgacccgacagcacagac
gaacagtgcatccacttctcagactgcgccagctgcacagccaacactcggggctgccag
tggtgcgaggacaggaagtgcatcgccgcctcgagcaactgcactgtgctgactctggag
ctggccctgcagcatggtggcgctctgtctctgtctccacctccatccatgttgtctgaa
catcagctcagcttatggaagcatggcgcgcgaaggaggggacattcggtgagagacccg
tccaggtgcaagcggcgggaggagcaggagtgtttccgactgaccaactgcaggagctgc
tccctgaacagcaactgtcagtgggaggtgcagcagcaggagtgccaggtgctgcctggg
cagctttgtggggatggctggtaccacgtcggggacgtctgcctgaggatcaactccagc
agggagagctacgataacgcacagcactactgcaaaaacctgggaggaaatatagcctct
ctgctcacagacaaccaaattggttttgttctggaggagctacacaagtatgagctggaa
aatcagaggttatctccgtgggtgggcttgcggaaaatcaacgtgtcctactggggctgg
gaggatgcgtccccattcaccaacagcactcttcagtggttgccgggggagcccagtgac
tcaggcttttgcgcctttttggagagaacggagtcggccggacttaaagccaatccctgc
accgccaccactgacggcctgatatgtgaaaaagctgctgggagtctgcacagtcaaaac
gctcgtccctgcaagacgccatgcgccctgcggaccagctgcgccaactgcaccagccag
gctatggagtgcatgtggtgtgggagcacccagcagtgcgtggactcctcggcgtacatc
atctctttcccgtacggccagtgtatggagtggcagacccaggaatgttctgctcagaac
tgtttgggtcacaggacctgcgctgagtgcctggagagagtcgagtgcggctggtgtggc
gaccccagcaacaccggcagaggcgtgtgcatggaaggttcctatcgtgggcctttgaag
ccttcaagtaccaggtctggatccagactgcgggacagggacatggtggtagatcagagc
ctctgctcttcggacagaggctacaattgggcttttatcgagtgtcctgcgtgtcaatgt
aacggccacagcaggtgtgtgaacagcagtgtgtgtgagcactgtgggaacctgacagca
gggacgcactgtcaggcctgcatccctggttactatggagaccccaccaatggaggaaag
tgtaacgtttgtaagtgtaacaaccatgccaatttgtgccacgtcagctctggaaaatgc
ttctgtaccacaaagggcatcaagggagaccagtgtcagctatgcgactcagagaaccga
taccttggtaaccctctccgtggaacctgttactacaacctgctgatcgactaccagttt
actttcagcctgcttcaggaggatgaccgccactacaccgccatcaactttatggccaca
ccagaacaggccaacaaaaacctggacatgtccatcaacgcctccaacaacttcaaccta
aacatcacctggtccttcagctcaacagctggtaccatatctggtgaggagatgtctgtc
atagcgaggaccaacatcaaggagcacagggacagcttctcatgtgaaaagtttaacttc
aggcttcaccacaatatcaccttttacatctacgtgtccaacttcagctggccaatcaag
atccagattgctttctcccagcacaacaccatcatggacctggtgcagttcttcgttacc
ttcttcagctgtttcctgtcgttgcttctggttgctgctgtggtttggaaaatcaagcag
acctgttgggcttcccggcgtagagagcgagatgaggtcagagctcttgctgatcagaga
aaactgaatgaagatttcacttttcagcagctgatgagagaacggcagcagatggccagt
cgtccctttgcttcggttgccgtggcgctggaggtgggcggcaaccaagaggagctgcaa
caggtttgtctcggccctgttgaatctggttccctctggagtaacttcccttatctctgc
ttcagtctggtttccatttcactctggaaggcggtgccgaagctctttgccatggagccg
tgctggggcagccgagcaggagtcctcactgtgctgctgcatctcccaagactcccatct
ggaatacctccacctggacagtctggtatcgccatagcgagcgctctggtggacacatct
cagcagcgagtggtggactctaaagaaagaggcctcggtctgaagcaccgcaaacacatc
gttcaccatcaggggacctgtgtatga
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integrated database retrieval system
