Gambusia affinis (western mosquitofish): 122842596
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Entry
122842596 CDS
T07758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122842596
04082 Neuroactive ligand signaling
122842596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122842596
Ion channels [BR:
gaf04040
]
Ligand-gated channels
GABA-A
122842596
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122842596
NCBI-ProteinID:
XP_043992555
LinkDB
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Position
LG13:24052318..24111522
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AA seq
460 aa
AA seq
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MAHSVSGGTVLTILLISRLLENSLLNAEVKEGEILPPTIQKLMKGYNKYLRPFFDDGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGHYPRLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTHADAHMLMYRHHMHDMDDDMNGIVTTIST
HSNRAKRRKEPVVTSPPAPASAELSVTPSSPSGSEPKPEVSPPEPTNWCLTTLATLRKIL
RFISCCHIENPHHIDNYSRVTFPLSFVFVNLLYWTYYLYF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctcactccgtgtctggagggactgtgctcaccatcctcctcattagcaggttgtta
gaaaactcgctgctcaacgcagaagtgaaggaaggagagattctgcctcctaccattcag
aagctgatgaaaggatacaacaagtatctcaggcctttctttgacgatggtcctgtgacg
gtgggcatgagtttggacatcgctagcattgacaccatttctgagattaacatggactac
acggccaccatatttctccgccagcgctggacggatgagcgcttggtgtttgagggcaac
aagagcctgagcctcgacggccgccttgtggagcttctctgggtgccagacacttttatt
gttgactccaaaaaatccttcctgcatgatatcacggtggagaacagactgatccgtatc
ttccccaatgggaccgtcctttatgctctgaggatcaccactactgtggcatgtaacatg
gatctgacgaagtaccccatggacaagcagacctgcacgttacaactagagagctggggc
tacaacatcaacgacgtcatgttttactggacccgaggaaatgagtctgtcagtggctta
gacaccctccaactggctcagtacaccgtagaggaccactacacatctgtctcagaagct
gtctatgaaacaggccattacccgaggctggttttccacttcgagctgaaaaggagcatt
ctgtatttcatcctggaaacttatgtcccctcaagcttgctggtggtcctgtcgtgggtg
tccttctggatttccttatcctctgttccagctcgaatttgcataggagtgaccacagtc
ctgactatgaccaccctgatgatgggagcccggacatcgctgcccaatgccaactgcttc
atcaaggccattgatgtctacttgggaatctgctttagcttcatctttggagctcttatt
gagtacgccgtggctcacttctgcactctaactcatgctgatgctcacatgttgatgtac
cgccaccacatgcacgacatggacgacgatatgaacggcattgtcaccaccatttccacg
cactccaacagagccaagagacgcaaggagcccgtcgtcacttcgccgccggctcctgcc
tcggcagaactcagcgtcaccccctccagtccttcaggcagtgagccaaagcctgaagtg
tcccctccagaacccaccaactggtgcctcaccactcttgccacactacgtaaaatcctc
cgctttataagctgctgtcacatcgagaatccccaccacatagacaactactccagagtt
accttccccctttcttttgtctttgtcaacctgctctactggacatattatctgtacttc
tag
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