Gambusia affinis (western mosquitofish): 122842624
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Entry
122842624 CDS
T07758
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122842624 (ddx21)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122842624 (ddx21)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122842624 (ddx21)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
122842624 (ddx21)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122842624 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122842624
NCBI-ProteinID:
XP_043992601
LinkDB
All DBs
Position
LG02:12641495..12650330
Genome browser
AA seq
745 aa
AA seq
DB search
MPSKIIFETEEETTEKDMDTVAEAETFKVKNKSKEGKKLKKKQQQSEEQGEDPDCDPPAP
KKKKKKDKLAADQENGPINEAADLNGNSEDVESPKKTKKKKKEASEKNQKQKKATTEAAT
NGHSITNTPVQTPSQTPAQSSDELASDSENEQTPEQKEGAFSNFRISKVTIDKLKARGVT
YLFDIQVKSFNAVYDGEDVIAQARTGTGKTFSFAIPLVEKLQNDSVEMTRGRPPKVLVLA
PTRELAIQVCKDFKDIAKRLSIACFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHLENNK
LNLTKLKHVVLDEVDQMLDMGFAEQVEEILGTSYKKDSDTNPQTLLFSATCPPWVYEVGK
KYMRPGCKHIDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGSHGRTIVFCET
KKEANELAMNASIKQSSQSLHGDIPQKQRETTLKGFRNGAFEVLVATNVAARGLDIPEVD
LVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPT
ANDIIKSSSKDATRFLDSVPATAVEYFRESAEKLIKEKGAVDALAAALAHISGATSLEQR
SLLNSDAGYATMQLLCSQEMHNLGYAWRTIKEQLGEDFEKHIHRMTFLKGKTGVCFDVPA
DKVKEIQDNWKDGRRWQLTVATELPELEEKPFTNRGDRGGFRGGRGRGFGGNGGRNGGFR
SGGGGGGGYNNRGGHKRTFNQAFDY
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaatcatctttgaaactgaagaagaaaccaccgagaaagatatggacact
gtcgcggaagctgaaaccttcaaggtgaagaacaagtcaaaggaaggtaagaagctgaag
aagaaacagcagcagtctgaggagcagggggaggatccagactgtgatcctccagcaccg
aagaagaaaaagaaaaaggacaagctggcagcggaccaagagaacggccccatcaatgag
gccgctgacctgaatggtaatagcgaggatgtagagtcaccaaaaaaaacaaagaagaag
aaaaaggaagcatcagagaagaaccagaagcaaaagaaagcaaccactgaggcagcaacc
aatggacattccatcacaaacacaccagttcaaactcccagtcagaccccagcccagtca
agtgatgagttggccagtgacagtgaaaatgagcagacacctgagcagaaagaaggagct
ttctctaacttcagaatttccaaagtcaccattgataaactgaaagctcggggagtcacc
tacttgtttgacattcaagtgaagtcatttaatgctgtatatgatggagaggatgtaatc
gctcaggcccgtactggaacaggaaagaccttctccttcgccataccgttggtagaaaag
ctccagaacgattcagtggagatgacgagaggccggcctcccaaggtgctagtcttggct
cctaccagagaattggctatccaggtctgcaaggacttcaaagacattgccaaaagactg
tccatcgcctgtttctatggaggcagctcatataacccacagattgatgctattcgtaac
ggaattgatattttggtgggaacgcccggtcgcattaaagatcaccttgagaacaacaaa
ctgaacctcaccaaactgaaacacgtcgttctggacgaagtggaccagatgttggacatg
gggtttgcagaacaagtcgaagagattttgggtacttcgtataagaaagacagcgacacc
aacccacagactcttctgttttctgcaacctgccctccttgggtgtatgaagtgggcaag
aaatacatgaggccaggctgcaagcatatcgacttgatcggcaagaaaacacaaaaagcg
gcaacaactgttgagcacctggccatcgcgtgccactggtcccagcgtgctgcagtgatt
ggagacgtagtccaggtgtacagtggcagccatggaagaacaatcgtcttctgcgaaact
aagaaggaagccaatgaattggccatgaatgcttctatcaaacagagttcccagtccctc
catggggatattccacagaaacagagagagacgactctgaaaggtttcaggaatggtgcc
tttgaggttcttgttgccacaaacgttgccgcccgtggattagacatcccagaggtcgac
ttggtggtccagtgttctccgccaaaggatgtcgagtcctacatccatcgttcagggcga
acaggacgagcgggcaggactggcgtctgcatctgcttctaccagaggaaggaagaggac
cagttacgctacgtagagaacaaagccggaatcactttcaggcgagtcggtgttccaact
gccaatgacatcatcaaatcgtccagcaaagacgccaccaggtttttggactccgttcca
gccacagctgttgaatatttcagggaatcagcagagaagctgatcaaagagaagggggcg
gtggatgcactcgctgctgctctggctcacatttctggagccacgagtctagagcagaga
tctctgcttaactctgacgctggttacgccacaatgcagttgctgtgctcccaggagatg
cataatctaggttatgcctggagaaccattaaagagcagctgggagaggactttgaaaag
cacattcacagaatgaccttcctcaaaggcaaaacgggagtttgttttgatgtcccagct
gataaagtcaaagagattcaggataattggaaagacggtcgccgctggcagctgactgta
gccacagagctcccagagctggaggagaagccgttcaccaaccgcggagacagaggcggg
tttagaggcgggagagggcgcggctttggtggaaatggaggacgtaatggcggcttccgg
agcggtggtggtggcggcggaggctacaacaatcggggaggacacaaacggacctttaac
caagcgtttgattactga
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