Gambusia affinis (western mosquitofish): 122842633
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Entry
122842633 CDS
T07758
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122842633 (rrp12)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
Other 90S particles
122842633 (rrp12)
Pre-60S particles
Other pre-60S particles
122842633 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
SEN1_N
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
122842633
NCBI-ProteinID:
XP_043992621
LinkDB
All DBs
Position
LG13:15209062..15221096
Genome browser
AA seq
1290 aa
AA seq
DB search
MVKSGKLRSGTAVKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSAKSDLTVDALKLHN
ELQAGPLELNAEARKDSQMEEGPDERLSERTSGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVESEESQAAVAYLLNLVMKRVPA
PVLKSKFSDTTKALMDVMSKQVSSDASSALRWILSCLATLLRKQDVSVWSYPSTLQAYHG
LLSFTVHSKPKVRKAAQQGVCSILRGSDFLFTDDAPSHHPAAVTTAKFCIKEIEQAGGSK
EDTTTLHVLCLLKELMGSFPLGTVKSCCETLLRVMTLSHVMVTASAMQAFHRLFIAKPNA
SSLSAELNAQIITALYDYLPSENDLQPLLAWLTVMEKAHVHLASLQSSLSLGHLPRLFSA
TMSCLLSPHTQVVSAATNTLKSLLTECVAPHMEEMGMITATASAGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQILGCFYRVAGKQAHPIMTKSLQSLSDLRSIPQFSFSGELDLAVGGA
VESMGPEVVLAAVPLNITGYNDDLEFPRSWLVPVIRDHVKNTRLSFFASYFLPLATTLKQ
RAEELEQEGKKLEAKVYQTLQLQIWTMLPGFCTCPVDLTASFKGVARTLGMAINERPDLR
LTVCQALRTLINKSCSTAEEKAELGRFSKNFLPILFNLYSQQPADGDSGAYRMAVLDTIK
VYLTVTDMQLICTLLQKASDRLTSSESVEFTRLAVMDLVVAMAPFVDESTMAKTFELIRP
YMEAKEPGMQKKAYRVLEEMCGAERDECKSFVLSNLETLKTVLLDTLKNASSPAKRPRLK
CLIHIVKRLNEEHKGFITALLPEVIICTKEVSVGARKNAYSLLVEIGNAFVRFCGNKKDA
MEEYLALVYAGLTGSVTMITCTILALTRLVFEYKDSIEVSTMEQLLQNVCLLLSSRTREV
VKAALGFIKVILFIMDPKALGSHVTLMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSMLPAEHHKVLTNIRKAEARNKRRKQVAEEQDASSESEEESPKGKSESIEDILAESD
SDLSEDEGKSRNTQKKSSRQKGKAWLKEGEGDDPLNFLDPKVSQRVLATNPQLKKITKVE
HGFKVTSDGRLIIREDDEVNGKNKGGEEMDDILEEAGVKSKKSQKRKFQDDNLDEDMDVE
PQLKYKAGGSGIHRPLGRSQNVGSDYKSKKGKGDVKKKGKLDPYAYIPLKKDQLNRRKRA
KLHGQFKGMVRGVQKGAQSGKKMQKKKRKA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcagggaaacttcggtcgggaaccgcggtcaagttaaagcgctggaagaag
ggacacagcagcgactctaatccgcagaccagccggttccgacaggcggcgaaaagccgc
tttttcagcagacccagcgcgaagagcgacctgactgttgatgctctcaagcttcacaat
gagctgcaggctgggcccctggagcttaatgcagaggcccgtaaggatagtcaaatggaa
gaggggcctgatgagagactgtcggaaagaacatcgggcaccttcctgagtggcctgtcc
gattgttccaacctcacattcagaaaggtgcagcgcttctgggagtccaactctgctgca
cataaagagatttgtgcagttttagctgctgttactgaagtgatccgaagtcaaggcggg
aaggaaacagagacggagtactttgctgctttaatgacgaccctggaagttgtggaatca
gaggaatctcaggctgcagtggcttatcttctcaaccttgtcatgaaacgtgttccagct
ccggtgcttaagtccaagttctcagacaccaccaaggctctcatggatgtcatgtctaaa
caggtttcatctgatgcatcttcagctctcagatggatcttgtcctgcttggccactttg
ttgaggaagcaggatgtttctgtctggagctacccatctactctgcaggcttatcatggt
ctgctcagcttcacagtgcacagcaagccaaaggtccgtaaagcagctcagcaaggcgtt
tgctccattcttcgaggcagcgacttcctctttactgatgacgctccaagccatcacccc
gctgctgtcactacagccaagttttgcatcaaagaaatagagcaggcaggaggtagcaaa
gaggacaccaccaccctccatgtgctctgcctcctgaaggagctgatgggatcgtttcct
ctgggaaccgttaagtcctgctgtgaaactctgctgcgtgtcatgactctcagccatgtg
atggtaacagccagcgccatgcaggcgtttcatcggctcttcattgcgaagccgaatgcg
tcttccctctctgcagaactcaatgcccagatcatcacggctctctatgactacctgccc
agtgagaatgacctgcagcctctgctagcctggcttaccgtcatggagaaagcacatgtt
cacctggcaagtttgcagagttctctgagtttaggtcacctccctcggctgttctctgct
accatgtcctgcctgctgtcgccgcacacacaggtggtctctgcagccaccaacacactc
aagagtttattgactgagtgtgttgctcctcacatggaggaaatggggatgatcactgcc
acagcctctgcagggaacccctcatatgtctgtaaaatgtttcgcattgtggaggaagga
ttatcatatcgctttcatgcctcgtggccctttgtgctgcagatccttggttgcttttac
agagttgcaggaaaacaagctcaccctatcatgactaagtccctgcagtccctgtcagac
ctgcgctccatccctcagttctccttcagcggggagttggacctggctgtgggaggcgct
gtggaaagcatggggcctgaagtggtgctggctgctgtgccgctcaacatcaccggctac
aatgacgacttggagttccctcgcagctggttggttccagtcatccgagatcacgtgaaa
aacactcgcctcagtttctttgcttcttattttctccctttggccactacactcaagcaa
agagctgaagagttggagcaagaaggaaagaagctggaagcaaaggtctaccagacttta
cagcttcagatttggaccatgcttcctggcttctgcacatgcccagtggacctgacggcg
tccttcaagggcgtcgcccggacgctcggcatggccattaacgaacgtccagacctgcgc
ctcaccgtgtgccaagctctgcgtacgctgatcaacaagagctgctccacagcggaagaa
aaggcagaattgggacggttctccaaaaacttcctgcccatccttttcaacctgtacagc
cagcagcctgcagacggggactctggtgcttacaggatggctgtgctcgacaccatcaaa
gtctacttaactgtcactgatatgcagctgatctgcacattgctgcaaaaagcctctgac
cggctgaccagctcggagagcgttgagttcacacggcttgcagtgatggaccttgtggtt
gccatggctcccttcgttgatgaaagcactatggccaaaacgtttgagctcataagacca
tatatggaggccaaagagccggggatgcagaagaaggcgtaccgcgtgttggaggagatg
tgcggagcagagagagacgagtgtaaatcctttgtcctctccaacctggaaactctgaaa
actgtcctgcttgacactcttaaaaatgcttcttcacccgcaaagaggccgagactcaag
tgtcttatccatatcgtgaaaaggttgaatgaggagcacaaaggcttcatcactgcgctg
ctgccagaggtgatcatctgtaccaaggaggtttcagttggagctcgtaagaacgcctac
agtcttctggtggaaataggaaacgctttcgttcgcttctgtgggaacaaaaaagatgcg
atggaggagtatttggctctggtgtatgcaggactcaccggttccgtcaccatgatcact
tgcaccattttggcattgactcgtctcgtgtttgagtacaaagactcgatagaggtttcc
accatggagcagctgctgcaaaacgtctgtctgctgctttcgtctcgaaccagggaggtc
gtcaaagctgcattgggcttcatcaaagtcatcctcttcatcatggaccccaaagctttg
ggctcacatgttacccttatgatggagggagttggaaacatcaaggatgatgtaagaagg
catttcagaaccaaactcaagaacatcttcactaaatttatccgaaagtttggctttgag
ctggtgaagagcatgctgcctgcagagcaccacaaggtgctgacaaacatccgcaaagcc
gaggcccgaaacaagaggcggaagcaggtcgcagaggagcaggacgcatcgtcagagagc
gaagaggagtcgcctaaaggaaaaagcgaaagtattgaagacatcctggctgagtccgac
agtgatttgtctgaggatgaaggaaagtctcgtaacacccagaagaaatcaagcagacag
aaagggaaagcgtggctgaaggagggagagggagatgatcctttgaacttcttggatcca
aaggtttcacaaagagttctagccacaaatccacagctgaagaagatcaccaaggtcgaa
cacggcttcaaggtgacctcagacggacggctcatcatcagagaagatgacgaggtcaat
gggaaaaacaaaggtggagaagagatggacgatatcctggaggaagcgggagtgaaatct
aaaaagtcccagaagagaaagtttcaagatgacaatttagacgaggacatggatgttgaa
cctcaattgaaatataaagccggcggctcgggtatccacagacctctgggacgaagccaa
aatgttggatccgattataaatcaaagaaaggaaaaggagatgtgaagaaaaaaggaaag
ctggatccttacgcttacatccctctgaagaaggaccagctcaatcgcaggaagcgagcc
aaactgcacggtcagttcaaaggcatggtgagaggcgtccagaagggggcgcagtctgga
aagaaaatgcagaagaaaaaaaggaaagcctga
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