Gambusia affinis (western mosquitofish): 122842702
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Entry
122842702 CDS
T07758
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122842702 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122842702 (srfb)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
122842702 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
122842702
NCBI-ProteinID:
XP_043992750
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Position
LG13:21344184..21375296
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AA seq
597 aa
AA seq
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MLPSQVGSAPSGNGSASGRTATAHGPGIRPVLVRTGQALPGVGESGGAAGRQGEREAAGM
LGANGPGGSRGARPGNGAGLNPLQTAVQGGIVGLNPGVVMPHGARFDPDRDSAPLCSGSD
NDSDSGDEDDPVGSLGDSRRGVKRERGEMEGAAAGQELGVPPGGYGMVTGGVAGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRSDPSMDQRMSATGFEETDLTYQVSESESMGDT
KDTLKPTFTVANLPGTTSSAQSTVPTTSTTMQVSTGASFPITNYLAPVSTSSNISANGTV
LKTAGASTGVMQLPSGFTFMSAGTPLPPSTPTIPLSQLQQHFLALQGQHGQTLAAAPQPQ
QGQQAVLRFPAAVSLTGAGVPQQLQAIQVHPNTQPTSNSDSSPEISHTSTNSTATVSLPA
TIVTSSVPTSVPGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTQAMQVSHQHSQDGG
AVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSSNLTELQVVNLDTTQSTKGD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttacctagccaggtcggatcggcaccatctggaaacgggtcggcatcgggcaggact
gctacggctcacgggccggggattcgtcccgttttggtccgaacgggtcaagccttaccg
ggggtcggtgagagcggcggagctgcggggcgacagggagagagagaggctgccgggatg
ctgggggcaaacgggccaggtggttctagaggggcgagaccggggaacggggccgggttg
aaccccctgcagactgccgtccaaggaggcattgtggggttaaaccccggggtggtgatg
ccccatggagcccgcttcgacccggaccgggatagtgctcctctatgcagcggctcggat
aatgattcggactctggagacgaggatgacccggtgggttcactcggggacagcaggaga
ggggtgaagagggaaagaggggagatggaaggggcggcagcgggacaggagctgggagta
cccccaggagggtatggcatggtgaccggaggagttgccggggcgaagccgggaaagaag
acacgtgggcgggtaaaaataaagatggaatttatcgataacaagttgagacgctatacc
acgttcagcaagaggaagacgggcattatgaaaaaggcctatgaactctcgaccttaaca
ggaacccaggttctgctgctggtggccagtgaaacgggtcatgtctatactttcgccacc
cggaaactccagcctatgatcacaagcgaaacgggcaaagccctgatccagacatgcctt
aactcgccagactctccgccgcgctccgacccctccatggaccagcgcatgagcgccacg
ggcttcgaggagacagacctcacctaccaggtgtcagagtcggagagcatgggcgacacg
aaggacacactgaagccaacattcactgtagccaatctaccaggcacaacgagcagcgct
cagtccacggtacccaccacctccaccaccatgcaggtgagcactggtgcatcgtttccc
atcaccaactacctggcgcccgtctcgaccagcagcaacatcagcgctaatggaaccgtc
ctcaagacagctggcgcctcaacaggagtcatgcagcttcccagtggcttcaccttcatg
tccgcaggcactcctctcccccccagcacccccaccattcctctgagccagctgcagcag
cactttctggccctccaggggcagcatggtcagaccctggccgccgccccacagccacag
cagggacagcaggctgtcctccgcttccctgctgctgtctccctcacaggagcaggcgtt
cctcagcagctccaggccatccaggtccatcccaacacacagcccacctccaacagcgac
agcagccccgagatctctcacacctccaccaactccaccgcaacggtgagtctcccggca
accatcgtcacttcgtcagtgccaacgtctgtgccgggccacatgatgtaccccagccct
cacacggtgatgtacgcctccacgccggcgctggccgacggggggctggccgtgctcaac
gccttctcccagggaacccaggccatgcaggtgtcccaccagcacagccaagacggaggt
gccgtccctcaggtgttcctcacagcacctccaggcacggtgcagatccctgtctcagcg
gtgcagctacacccaatggtgattggccagcagtcgagcggcagcagcagcagtaacctg
acggaactccaggtggtcaatctggacacgacacagagcacaaagggcgactga
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