Gambusia affinis (western mosquitofish): 122842766
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Entry
122842766 CDS
T07758
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04517
IgSF CAM signaling
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122842766
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122842766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122842766
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122842766
Intermediate filaments
Intermediate filament-binding proteins
122842766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
DUF7854
Motif
Other DBs
NCBI-GeneID:
122842766
NCBI-ProteinID:
XP_043992845
LinkDB
All DBs
Position
LG13:complement(27418340..27495000)
Genome browser
AA seq
1668 aa
AA seq
DB search
MTSVAAEFDHMEIQQQYSDGVNNRWDADDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEKAEHERELALRTELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAESYHDIKRITARKDNVIRLWEYLLELLKARRHRLELNLGLQRVFQEMLYI
MDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVRNVNSNAQKFASDTDG
YKPCDPQVIRDRVAHMEFCYQELNQLAAERRARLEESRRLWKLKLPLFHFNRKAHLAPWA
ELCVVVVLQDGQALMAEKPETEAMVKEKLTSLKVMWDDLESTTQTKAKCLFDANKAELFT
QSCADLDKWLTGLDSQLQSDDFGKDLTSVNIMLKKQQMLESQVEVRQKEVEELQKQSQAL
SQEGKGSDEADGKRISVENKFQMLLAPLKMRRDNLMASREIHQFNRDVEDEILWVEERLP
LATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQQVLRAGSPTAEPIRLRL
TELQALWERIRKETENRHSRLSEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSS
VAMLKKHQILEQAVEDYADAVHQLSSTSRGLVAAGHPDSERIGMRQSQVDKLYAGLKDLA
EERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDT
GNIGQERVDGVNKLADELINTGHGDAATIAEWKDGLNEAWADLLELIDTRTQILAASYEL
HKFYHDAKEILHRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDA
VRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEARRSKLLDTADKFRFFSMVRDLMLWM
DDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKALLARKHYAAEE
IKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSREMGQ
SVDEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEVRRRQEEEERKRQPAEAAEAA
AQSREGEPVSQNGLPSDQESPRENVDEAVNGVSEPSPAGSPGAARKAKPSQAATLPAKSQ
QDGATSLLEAFLHRKHEWEGHNKKASNRSWHNVFCVINQQEMGFYKDQKSAAQGVPYHSE
IPVSLKEALCEVALDYKKKKHVFKLKLTDGNEYLFQAKDDEEMNSWISAIVAAAGSRVEV
TPSSHSTPAPAPRAQTLPATVAASTAESSPGKREKDKEKRFSLFSKKK
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtggcggcggagttcgaccacatggagatccagcagcagtacagcgacggc
gtcaacaaccgctgggacgccgacgactgggacaacgagaacagctcggcccgcctcttt
gagcgctcacgcatcaaggctctggcagatgagcgtgaagcggtgcagaagaagaccttc
actaagtgggtgaactcccacctgtccagggtgtcgtgtcggatcacggacctgtacatg
gacctgagggacggccggatgctcatcaagctgctggaggttctgtctggagagaggctg
cccaaacccaccaagggccgcatgcggatccactgcctggagaacgtggacaaggccctg
cagttcctgaaggagcagcgggtccacctggagaacatgggctcccacgacatcgtggac
ggaaaccaccgcctcacgctgggcctcatctggaccatcatcctgcgcttccagatccag
gacatcagtgtggagacggaggacaacaaggagaagaagtcggctaaagacgctctgctg
ctctggtgccagatgaagactgcagggtatccaaacgtcaacattcacaacttcaccacc
agctggagagacgggatggccttcaacgccctcatccacaaacacagacctgatctgatc
gactttgataagctgaagaagtccaacgctcactacaacctgcagaacgccttcaacctg
gcagagcaacacctggggctcaccaagctactggacccggaagacatcagcgttgaacat
cctgatgaaaagtccatcatcacctacgtcgtcacctattaccactacttctccaagatg
aaggcgctgaaggtggagggcaagaggatcggcaaggttctggacaacgccatcgagacg
gagaagatgattgagaagtacgagtctctggcgtcggacctgctggagtggatcgagcag
accatcatcatcctcaacaacaggaagttcgccaactcgctggtgggcgtccagcagcag
ctgcaggccttcaacacgtaccgcaccgtggagaaaccgcccaagttcacagagaagggg
aacctggaggttctgctcttcaccatccagagtaagatgagagccaacaaccagaaagtt
ttcacgccgcgtgaaggaaagctcatctccgacatcaacaaggcctgggagcgtctggag
aaggcggagcatgagcgggagctggccctgaggacggagctgatccgccaggagaagctg
gagcagctggcccgccgcttcgaccgcaaggccgccatgagggagacgtggctgagcgag
aaccagaggctggtctcacaggataactttggattcgacctgcaggccgtggaggcggcc
actaagaagcatgaagccatagagacggacatcgcggcgtacgaggagcgcgttcaggcg
gtggttgccgtggcgagggagctggaggcggagagttaccatgacatcaagcgcatcacg
gccaggaaggacaacgtgatccggctgtgggaatacctgctggagctgctgaaggcccgg
cgccacaggttggagctcaacctgggcctgcagagggttttccaggaaatgctctacatc
atggactggatggacgagatgaagatgctgctgctgtcccaggactacgggaagcacctg
ctgggtgtggaggatctgctgcagaaacacgctctggtggaggccgacatctccatccag
gccgaccgcgtccgcaacgtcaacagcaacgcccagaagttcgccagcgacaccgacggc
tacaaaccctgcgacccgcaggtcatccgggaccgcgtggcgcacatggagttctgctat
caggagctgaaccagctggcggcggagcggcgcgcccgcctggaggaatcccgccgcctc
tggaagttaaagcttcctttattccactttaatcgtaaagctcatcttgctccctgggct
gagctctgtgtggtggttgtgctgcaggacggccaggcgctgatggcagagaagccagag
acggaggccatggtgaaggagaagctgacgtccctgaaggtcatgtgggacgaccttgag
tcgaccacccagaccaaggccaagtgtctgtttgacgccaacaaggctgagcttttcacc
cagagctgcgccgacctggacaagtggctgaccggcctggacagccagctgcagtccgac
gacttcggcaaagacctgacctccgtcaacatcatgctgaagaagcagcagatgctggag
agccaggtggaggtgcgtcagaaggaggtggaggagctgcagaaacagtcgcaggcgctg
agccaggaggggaaaggttctgatgaggcggacgggaagcggatcagcgtggagaacaag
ttccagatgctgctggcgccgctcaagatgcggcgcgacaacctgatggcgtcccgcgag
atccaccagttcaacagggacgtggaggacgagatcctgtgggtggaggagcggctgcct
ctggccacgtccaccgaccacggacacaacctgcagacggtgcagctgctcatcaagaag
aaccagacgctgcagaaggagatccagggccaccagcctcgttacgacgacatctttgag
cgcagccagcaggtcctgcgggccggcagccccacggccgagccgatccggctgaggctc
accgagctgcaggcgctgtgggagcggatccggaaggagacggagaaccggcattcccgc
ctcagcgaggcccacgaggcccagcagtactactttgatgctgcggaggccgaggcctgg
atgagcgaacaggagctgtacatgatgtctgaggagaaggccaaggatgagcagagctcg
gtggccatgctgaagaagcatcagatcctggagcaggcggtggaggattacgccgacgcc
gtccatcagctgtccagcaccagccggggcctggtggccgcaggacaccccgacagcgag
cgcatcggcatgcggcagtcgcaggtggacaagctgtacgcggggctgaaggacctggcg
gaggagcggcgcgggaagctggacgagcgtttccgtctgttccagctgaaccgggaggtg
gacgacctggagcagtggatcgccgagagggaggtggtggccgggtcgcacgagctgggc
caggactacgagcacgtcacgatgctgcaggagcgtttccgagagttcgcccgcgacacg
gggaacatcggtcaggaacgcgtcgacggcgtcaacaagctggcggacgagctgatcaac
acgggccacggcgacgcggccaccatcgccgagtggaaggacgggctgaacgaggcctgg
gccgacctgctggagctcatcgacacgcgcacgcagatcctggccgcctcctacgagctg
cacaagttctaccacgacgccaaggagatcctgcaccgcatcctggacaaacacaagaag
ctgccggaggagctgggccgcgaccagaacaccgtggagacgctgcagaggatgcacacc
accttcgagcacgacatccaggcgctgggcacgcaggtccggcagctgcaggaagacgcc
gtccgtctgcagtcggcgtacgccggagacaaagccgacgacatccagaagagagaagga
gaggtgctggaggcctggaagaacctcctggaggcggcggaggcccggcgctccaagctg
ctggacacggccgataagttccggttcttcagtatggtgcgggacctgatgctgtggatg
gacgacgtcatccggctcatcgaggcccaggagaagcccagggacgtgtcgtcggtggag
ctgctgatgaacaaccatcagggcatcaaggcggagatcgacgcccgaaacgacagcttc
acgtcctgcatcgagctgggcaaggcgctgctggccaggaagcactacgctgcagaggag
attaaggagaagttgctccagctgacggataagaggaaagagatgatcgataagtgggag
gaccgctgggagtggctgaggctggtgctggaggtgcaccagttctcgcgggacgcgggc
gtggcggaggcgtggctcctgggccaggagccgtacctgtccagccgggagatgggccag
agcgtggacgaggtggagaagctcatcaaacgccacgaggccttcgagaagtccgccgcc
acctgggaggaacgcttcgccgcgctggagaggctgaccacgatggagttactggaagtg
agaagaaggcaagaggaagaggagaggaagaggcagccggccgaggctgctgaggctgca
gcccagagcagggagggcgagccggtgtctcagaacgggctgccgtccgaccaggagtcg
ccccgggagaacgtggacgaggcggtgaacggggtgtcggagcccagccccgcggggtcg
ccgggcgccgcccgtaaggccaagcccagccaggcggcgacgctgccggctaagagccag
caggacggcgccacctctctgctggaggccttcctgcaccgcaaacacgagtgggagggt
cacaacaagaaggcctccaacaggtcctggcacaacgtgttctgtgtgatcaaccagcag
gaaatgggtttctataaggaccagaagagcgcggcgcagggcgtcccctaccacagcgag
atccccgtcagcctgaaggaggcgctgtgtgaggtggcgctcgactacaagaagaagaaa
cacgtcttcaagctcaagctcactgatgggaacgagtatctcttccaagccaaagacgac
gaggagatgaactcctggatctcggccatcgtggcggcggcgggctccagggtggaggtg
acccccagcagccacagcacgccggcccccgccccgcgcgcccagacgctgccggccacc
gtggcggcctccaccgccgagtccagcccgggaaaacgggagaaagacaaggagaaacgc
ttcagtctgttcagcaagaagaagtag
DBGET
integrated database retrieval system
