Gambusia affinis (western mosquitofish): 122842767
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Entry
122842767 CDS
T07758
Symbol
nfkb2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122842767 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122842767 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122842767 (nfkb2)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122842767 (nfkb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank
Ank_2
Ank_3
Ank_4
Ank_5
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
122842767
NCBI-ProteinID:
XP_043992846
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All DBs
Position
LG13:27688482..27699394
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AA seq
867 aa
AA seq
DB search
MSPAGLILDTWTGDHVSQQNQQNGSSAKVWRTGDATEEQTPPREPQFRTGSPPSSSCASL
TLQDSVREFLRTEADSKSEERNQGKPGRRKIRSSSSSPPDMAGALRMTEPQFVNYGDDNM
QLANFLPYDFIPPMEIKTEPYIPETAHGPYIQIIEEPKQRGFRFRYECEGPSHGGLPGAS
SEKNRRTYPTVKINNYVGHARVEVQLVTHTDPARVHAHSLVGRHCNENGTCSLDIGPNDL
TASFSNLGILHVTKKGVVEVLTRRLRDERRRQKGTHCQLTGTQHTSHLDTHKDLDTVMDL
NIVRLRFTAFLQDSNGGFTRALKPVVSNPIYDSKSPNASNLKISRMDKTCGSVLGGDEIF
LLCDTQSQTQTTSRSTFYLREHRHGCWRPSLLSTHGTHKQGEEPRCQAPPLQRQAPPPSR
VRVRPARLCSSNCFGSPERDKFRGTFLNPNRKETEPFGVPVFSAWTWRGSGSVLVLVSLT
ARLSPGFQFSQMNGGPGGGTFYTGGFTNFPSGGGAQMSGSAPPTSGSAPQQGEXPPARLQ
QQLLGCECYAPETPLHLAVITRQVKVAEVLLRCNHLQQTPLHLAVITRQVKVAEVLLRAG
ADPTLVDKDGRSPLHLAALAGDTATLRLLLAHLGEHHAHLVNTPDYHGXGAEPALTLMRR
RGAELWLCVCRSAAKVACTLITELKADVNTCTFGGNTPLHLAASLGFPTLCSMLIAAGAD
KNMENDALMFQLPGGQRSEEATNQRGRLSSHLSEGSRAGGAQTWCPWMKLAEKLGMVALV
GARSRTHGLTALPHLQASMALLQHYKLGGGPVEGLVEALQALGLTEGVQLLRNTELRDDK
LSSDATVDSGFSSQPMEEQQQEEMTNQ
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgcaggactcattctggacacatggaccggagaccatgtgtctcagcagaac
caacagaacggttcttcagcaaaagtctggagaaccggtgacgccacggaggagcaaacc
cctccccgggaaccacaattccgaaccggaagtcccccgtcctcctcgtgcgccagtttg
acgcttcaggattcagttcgggagtttttgcgaacagaagcggacagtaagagcgaagaa
agaaaccagggaaaacccggcaggaggaagatccggtcctcctcttcctcacctccagac
atggccggagcgctcaggatgactgaacctcagttcgtgaactacggagacgacaacatg
cagttagcaaacttcctcccctatgacttcattcctccgatggagatcaagacggagccg
tacatacctgagacagctcacggcccgtacatccagatcatcgaggaacccaaacagcgg
gggttccggttccgttacgagtgcgaaggcccgtcccacggcgggttaccgggggcgtcc
agtgagaagaaccggaggacttacccgaccgtgaagatcaacaactacgtgggccacgcc
cgggtggaggtccagctggtgacccacaccgacccggcccgggtccacgctcacagcctg
gtgggacgccactgcaacgagaacgggacctgcagcctggacatcggacccaacgacctg
accgcctcgttcagcaacctgggaatcctccatgtgaccaagaagggcgtggtcgaggtt
ctgacccgacggctccgagacgagaggcggagacagaaaggaactcactgtcagctcaca
ggtacacaacacacttcacacctggacacacacaaggacctggacacagtcatggacctg
aatattgtccgtcttcgcttcaccgccttcctgcaggacagcaacggcggcttcaccagg
gcgctcaaacccgtggtgtccaaccccatctacgacagcaagtctcccaacgcatccaac
ctgaagatctcgcggatggacaagacgtgcggatcggtgctgggaggagacgagatcttc
ctgctgtgtgacacacagtcacagacacagacgacatcgagatccacattctacctgagg
gaacacagacacggttgctggaggccttcacttctctccacacacggcacccacaagcag
ggggaggagcccagatgtcaggctccgcccctccaacgtcaggctccgccccccagcagg
gtgagggtccgcccggctcggctgtgcagcagcaactgcttcggatcgccagagagggac
aaattcaggggaaccttcctgaacccaaacaggaaggaaacagaaccgtttggggtccca
gtgttcagtgcttggacctggcgaggttctggttctgttctggttctggtgtctctaacg
gctcgtctctctccaggtttccagttctcccagatgaacggaggaccaggaggcggaact
ttctacaccggaggcttcacaaacttcccctcagggggaggagcccagatgtcaggctcc
gcccctccaacgtcaggctccgccccccagcagggtgagngtccgcctgctcggctgcag
cagcaactgcttggatgtgagtgttatgcaccagaaacgccgctccacctggcggtcatc
acgcggcaggtgaaggtagcggaggtgctgctgcggtgcaaccacctgcagcagacgccg
ctccacctggcggtcatcacgcggcaggtgaaggtagcggaggtgctgctgcgggcgggg
gccgaccccaccctggtggacaaagatggccgcagcccgcttcacctggctgcgctggcc
ggagacacggccacgctccgcctcctgctggcccacctgggagagcaccacgcacacctg
gtgaacacgccggactaccacggtngaggggcggagcctgcgctgaccctgatgcgtcgg
cgaggcgctgagctgtggctgtgtgtctgcaggtctgcagccaaagtggcctgcacgctc
atcactgagctgaaggccgacgtcaacacctgcaccttcggaggaaacacgccgttgcac
ctggcggccagcctgggcttccccacgctctgctccatgctgatcgctgcaggtgctgat
aagaacatggagaacgacgccttaatgtttcagctgccaggcgggcagaggtcagaggag
gcgacgaatcagcgagggaggctgagcagccacctgtcagaaggtagcagagctggcggg
gcgcagacctggtgtccctggatgaagctggccgagaagctgggcatggtggcgctggtg
ggcgccaggtcgaggacgcatgggctgacggccctgccgcacctccaggccagcatggcc
ctgctgcagcactacaagctgggtggtggtccggttgaaggcctggtggaggcgctgcag
gctctggggctgacggagggagtccagctgctgaggaacacggagctgcgagacgacaag
ctcagctcagacgccacggtggacagcggcttcagcagccagccaatggaggagcagcag
caggaggagatgaccaatcaatga
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