Gambusia affinis (western mosquitofish): 122842855
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Entry
122842855 CDS
T07758
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122842855 (zswim8)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122842855 (zswim8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
122842855
NCBI-ProteinID:
XP_043993014
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All DBs
Position
LG13:3536283..3559585
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AA seq
1948 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVTPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVSSQSGQSKAAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPTRRLELASQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEAAY
PLEGITYCSADKKNSPFCWPRAMQFQRGVKAAVGAAGEPSEAGAASKAEGGVVLDYKGRG
NGHFSQQEVAVRPKETILSKRKGLSLSGGGGMLVRLGGSVSLSLEDGGGKCMYKGAASSS
GGKLKLTQGGGKVPSAGGSGGSGGLGSGKHASAKRRTSSEDSSLEPDLADLSLDDSCNLA
LGAEACNTFEFLPAPAEVLPSPSPLLRDLPKYSRGGGGGSKSFDMKHAGHVPAALTAAES
APACFTAKEHMEVAVDTAEGFTEPNGRSEDMPSSCTGTARPGSPPDSAKAPWGNREAEPA
AVEAAGAAAANQGAEAAGGASEGEALAEDDYQAYYLSAASEEGADKQLADSHQEEEPDIF
AGIKPLEQAGRMEVLFACAEALYAHGYSNEACQLAVELARDLLANPPDLKVEQPQTKGKK
SKVSTSRQTQVATNTLSKAAFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKL
AYQESEVVALLKKIPLGLVEMSAIRERAEQLRDGNLCDYRPVLPLMLASFIFDVLCTPVV
SPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRRVKGDLALAL
MITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAGGSQRSPSKHTAGSHSGIGG
ATGGVTKHALSSSSSNTLAASSSSSSSAVALAGEEVTSQVELSLLQNSTAVENAADTKEH
VSDGAQLSSEQQNETASFKPEATVPSRLALGGRCGYSQRCWGSPVRQKKKHTGMASIDSS
APETTSDSSPTLSRRPLRGGWAAASWARGQDSDSISSSSSDSLGSSSSSGSRRAGGGARA
KSTDTSRYKGRRLECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGG
HQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVEC
WDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDN
VMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQSMGGGAGQQRDPPGRCGANGSSG
RRPPDASCAVLDGVANMDTSGVGAVTASVTAAAIVPVISVGSTIYQSHAIPGQAMSHPHS
QGLHPYTTIQAHLPSVCTPQYLGHPLQHVPRPAVFPVSGASYPQGIHPAFIGAQYPFSMA
PGPQPSLSAAAVTFPAVPVPSMTQIAVHPYHTETGLPLSTTVAVGSVHSGPTIQAIQGAS
LPTVSPQPAPLVSAPFTAEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNN
FSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIH
AHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFN
DVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgtttgctgagtgggaggatggggagaggttctccttcgaagactcagac
aggttcgaggaagactccctgtgctccttcatctccgaggccgagagcctctgccagaac
tggagaggatggaggaagcagtctgccgggcccaactccccgaccgtcaagattaaagac
ggccaggtgacccctctggtggagttatcggcgaagcaggtagctttccacatcccgttc
gaggtggtggagaaggtgtaccccccagtcccggaacagctccagctccgcattgccttc
tggagcttcccagagaatgaggaggacatcaggttgtattcctgcctggctaatggcagt
ccagatgagttccagcgtggagagcagctgtacaggatcagagccgtcaaagaccccctt
cagatcggcttccatctcagcgctaccgtagtgtccagtcagtctggtcagtctaaagca
gcctacaacgtggccgtcatgtttgaccgctgccgcatcacttcctgcagctgtacctgc
ggcgccggggcaaaatggtgtgcccacgtagtcgctctctgccttttcagaatacacaat
gcttcagcggtctgtctgagggctccggtgtcagagtctttatccaggctgcagagggac
cagctccaaaagtttgcccagtacctcattagtgagctgcctcaacagatcctacccaca
gcccagcgtctgctggacgagttgctgtcttctcagtctacagccatcaacactgtgtgt
ggagctccagatccgacggcagggccttcagcatctgatcagagcacctggtatctggac
gagtcgaccctcagcgacaacattaaaaagactttgcacaagttctgtggaccctctcct
gtcgtgttcagtgatgtgaactccatgtacctgtcctccactgagcctccggcagctgct
gagtgggcgtgcctgctgcgtcctctgaggggccgggaaccagagggcatctggaacctt
ctgtccatcgtcagggaaatgtttaagaggcgagacagcaacgccgcgccactgctggag
atcctcactgaacagtgccttacctatgagcagatcatcagctggtggtacagcgtcaga
acctcggcgtcccacagcagtgccagcggccacacagggcgcagcaacggccaatcagag
gtggcggctcacgcctgcgccagcatgtgtgatgagatggtcgtcctgtggaggctggcg
gtgcttgaccccaccatgagccccaccaggcggttggagctggctagccagctgaagcag
tggcatctgaaagttatcgagatcgtgaaacgaggacaacatcgaaagtcgctggataaa
ctcttccagggcttcaagcccgctgtggaatcttgctacttcaactgggaggcggcttat
ccgctggaaggcatcacctactgcagcgcagacaagaagaacagcccgttctgctggccc
agggccatgcagttccagaggggagtgaaggctgccgtcggagcggccggcgaaccttct
gaagcaggagcagcgagcaaagcagagggcggagtggtgctggactacaaaggaaggggg
aacggccatttctcccagcaggaggtggctgtgagaccaaaggagactattctgagcaaa
cggaaaggtttgtcactgagtggaggaggagggatgctggtccggctgggggggagtgtc
tctctgtctttagaggacggtggggggaagtgcatgtacaaaggagctgcttcctcctcc
ggaggcaaactgaagctgacccagggaggagggaaggttccgtcggctggaggttctggg
ggcagcggagggttggggagcggtaaacatgccagcgccaagcgcagaaccagcagtgag
gacagttctctggaacctgacctggctgacctcagtctggatgacagctgtaacctggct
ctgggagccgaggcctgcaacaccttcgagttcctccccgccccggcagaggtgctgccc
tctcccagcccgctcctccgagacttgcccaaatacagcagaggtggcggcggcgggagc
aagagttttgacatgaagcatgcgggtcacgtccctgcggcactgactgctgcagagtct
gctccagcctgttttactgccaaagaacacatggaggtggctgtggacacggcggagggg
ttcactgagcctaacgggagaagcgaagacatgccgtccagctgcactgggacagccaga
cctggcagccctccagattctgccaaggcaccgtggggcaacagggaggcagaacctgca
gctgtagaagcagcaggtgcagcagcagctaaccagggggcggaggctgcaggtggagct
tctgaaggagaagctctggctgaggatgactaccaggcgtactacctgagcgctgcatca
gaggagggagccgacaagcagctggccgacagccaccaggaggaagagccagacatcttt
gcaggaattaaacctctggagcaggcaggacgcatggaggtgctgtttgcatgtgctgaa
gccctgtatgctcatggctacagtaatgaggcatgtcagctggctgtggagctggccaga
gacctgctggccaatcctcctgacctgaaggtggagcaaccccagaccaagggaaagaag
agcaaggtgtcgaccagccgtcagactcaggtggccactaacactctgtccaaagctgcc
ttcctcctcacggtcctcagcgagaggctggagctccacaacctggctttcagtaccgga
atgttctccctggagctgcagaggccgcctgcctctactaaagctctggaggtgaagctg
gcctaccaggagtcggaggtggtggcgctgttgaagaagattcccctaggcttggtggag
atgtcggccatcagagagcgagccgagcagctcagggacggaaacctctgtgattacaga
ccggtgctgccattgatgttggccagtttcatatttgacgttctgtgcaccccagttgtg
tccccaactggttcccgtccacccagtcgcaaccgaaacaatgagatgcccggggacgag
gagctgggctttgaagctgctgtagctgctcttggtatgaagacgacagtcagcgaggcg
gagcatcctttgctctgtgaaggaactcggcgggtgaagggtgacctggctttggccctc
atgatcacctacaaggatgaccaaagcaaactcaagaagatcttggataagctgctggac
agggagagccagacccacaagcctcagactctgagctcgttctactccagcaagccagca
gggggcagtcagcgcagcccgtccaaacacactgctgggagccacagcgggatcggaggc
gccaccggaggggtcaccaaacacgccttgtcatcgtcctcatccaacaccttggctgcg
tcttcctcaagctcttcctctgctgtggctctggctggggaggaagtgacctcacaggtc
gagctcagcctgctgcagaacagcacagccgtggagaacgctgctgacaccaaggagcat
gtttcagatggagcacagctttcaagtgagcagcagaacgaaactgcgtcctttaaacca
gaggccacagttcccagtcgactggctctaggagggcgctgcggctacagccagcgttgc
tggggctcgcctgtccgccagaagaagaaacacactggcatggcgagcatagacagcagc
gctcctgagacgacctcagacagctccccgaccctcagccgcaggccgctccggggtggg
tgggcggcggcgtcctgggcgcgtggacaagacagcgacagcatcagcagctcttcatca
gactcgctgggctcctcctcctccagtggttcacgcagggctgggggcggggctagggcc
aagagcaccgacaccagcaggtataaagggcgccgcctggagtgtcatgccccccatgtg
cccaaccagccctccgaggcagctgcccatttttactttgaactggccaagacggtgctg
atcaaggccggagggaactcctccacctccatcttcacccagccctcagccagcggcggt
caccaggggccacacaggaacctccatctctgtgccttcgagattggactgtacgctctt
ggcctccacaattttgtttcgcccaactggctgtccaggacctactcatctcatgtctcc
tggataactggccaagcgatggagattggcagcgcagccctgaatatcctggtggagtgc
tgggatggccacctgactccaccagaggtggcgtccctggctgaccgggcatcacgggcc
agggaccccaacatggtccgggcagctgcagagctggcgctcagctgcctgcctcacgct
cacgccctcaaccccaatgagatccagagagccttggttcagtgcaaagaacaggacaac
gtgatgctggagaaggcctgcatggccgtggaggaggcagcgaagggtggcggtgtgtat
cctgaggtcctgttcgaggtggcccatcagtggtactggctgtacgagcagtcaatgggc
ggcggtgctggccagcagcgggatcctccaggccgctgcggggccaacgggagctctggc
cggaggcccccagatgcctcctgcgctgtgctggacggcgtagccaacatggacacttcg
ggggtgggagcggtcacagcttcggtcactgcggcggccatcgtccccgtcatctctgtg
ggctccaccatttaccagtcccatgctattcctggccaggccatgtcccacccccacagt
caggggctgcacccctacaccaccatccaggcacacctcccctccgtctgcaccccgcag
tacctgggacaccctctgcagcatgtaccccggcccgccgtcttccctgtgtctggggca
tcatatccacaggggatacatccagctttcatcggggcccagtaccccttctcaatggct
cccggcccccagccctctctgtccgccgcggccgtcaccttcccagccgtcccggtgccg
tccatgactcagatcgccgtccacccctaccacaccgagacgggcctgcccctgagcacc
accgtggcagtgggcagcgtccactctggccccaccattcaggccatacagggggcgtct
ctgcctaccgtttccccccagcccgctccgctggtgagcgcccccttcacagcagaagac
gagcagcacagccagccaatcagccagcagggcctgcactacctgcactcagcgtacaga
gttgggatgctggcactggagatgctgggcaggagggctcataacgaccatcccaacaac
ttctccagaagtccaccttacactgaagacgtaaagtggctgctgggactagctgcacgg
ctaggagtcaactatgtgtaccagttctgtgttggagcagccaaaggagtcctcagtcca
ttcgtcctgcaagagatcatcatggaggctctgcagaggctgaatcctgcccacatccac
gctcacctccgcacgcctgctttccaccagctggtgcagcgctgccagcaggcataccta
cagtacatccaccaccgactcatccatctgacacctgccgactatgacgacttcgtcaac
atcatccgcagtgcccggggggcgttttgcctcacgccggtggggatgatgcagttcaac
gacgtgctgcagaatctgaagagaggcaaacagaccaaggagctgtggcagcgcatctca
ctggagatggccacattctccccataa
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