KEGG   Gambusia affinis (western mosquitofish): 122842878
Entry
122842878         CDS       T07758                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03430  Mismatch repair
gaf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    122842878 (mlh1)
   03460 Fanconi anemia pathway
    122842878 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122842878 (mlh1)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     122842878 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 122842878
NCBI-ProteinID: XP_043993092
LinkDB
Position
LG13:26015972..26025891
AA seq 732 aa
MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKATNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPADEYSRIVDVVSRY
AIHNSGRSFSVKKQGETVADVRTLPNASVVDNIRSVFGNPVSRELIEVGCQDQKLAFTLK
GFVSNANYSMKRCILVLFINHRLVESSALKKAVETVYAAYLPKNSHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVMESVQKHIESKLLGSNSSRTYFTQTLLPELSVSGGSEVKPS
GSSESAERVYAHQMVRTDCRAQKLDAFLQPKEKPAPDPETAGPSGSPVATRTTELDSLEL
DDADMLEVALQEPGPAGEEERSGAAEEAQRKRPREKEDEKEEDEKEEDEGLTAAATPKRR
VIKLTSIKDLRAEITENTHRGLQEMLQKHSFVGCVDPQWSLIQHHTKLYLLNTTTLSREL
FYQILIFDFGNFGVLRLSTPAPLYELAMLALDSAESGWTEEDGPKEGLAQYIVDFLKKKA
EMLEDYFSMEIDQEGNLTGLPLLLDKYTPIMEGLPLFILRLATEVNWDNEKECFRDFSKE
CSAFYSIRKQFVLEAEPGDEPESDGNSWRWNVEHVLFKALRTLFSPPKSFSEDGTVLQIA
NLPDLYKVFERC
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggcgggagtgattcggaggctcgatgaaactgttgtcaacaggatcgcagcgggagaa
gttatccagcgtcctgccaacgccgttaaagaattgatcgaaaactgtttggacgcaaaa
gccaccaacatccaggtgacggtgaaggacggaggcctgaagctccttcagatccaggac
aatggtaccgggatcagaaaagaagacatggagattgtttgtgagcggttcaccaccagc
aaactgcagacctttgaggacctttcagcgattgcaacctacgggttcagaggagaggct
cttgccagtataagccatgtggctcatgttaccataacaaccaagacagctgatgcaaag
tgtgcttacagagcgagctacagcgatggcaaactgaagggccctcctaagccctgcgct
gggaatcaggggacccagatcctggtggaggaccttttctataatgtgtccaccagaagg
aaggccctgaagagcccggcagatgaatactccaggattgtggacgtggtcagcaggtac
gctattcacaattcaggaagaagcttctcagtcaaaaagcaaggagagacggtggcggac
gtgaggacgcttcctaacgcgtccgtcgtggacaacatccgcagcgtcttcggaaacccg
gtcagcagggagctgatcgaagtcggctgccaggaccagaagctggccttcaccctgaag
ggcttcgtctccaacgccaactactccatgaagcgatgcatcctggttctgttcattaac
caccggctggtggagtccagcgctctgaagaaagccgtggaaacggtttacgcagcctac
ctccccaaaaactcacaccccttcctctacctcagcctggaaatcgctccgcagaacgtc
gacgtgaacgttcaccccaccaaacacgaagtgcacttcctgcatgaggacagtgtgatg
gagagcgttcagaagcacatcgagagcaaactgctgggctccaactcgtcccggacgtac
ttcactcagacgttgctgccggagctgtctgtgtccggcggttctgaagtaaaaccctct
ggatcctctgagtccgccgagcgcgtctacgcccatcagatggtccggaccgactgccgc
gcccagaaactggacgccttcctgcagccaaaggagaagccagcccctgacccagagacg
gccggtcccagcgggtcgccagtggcaaccaggacaactgagctggacagtctggagctg
gatgacgcagacatgctggaggttgcgctgcaagaacctggtccagcaggtgaagaggaa
cgcagcggcgctgccgaggaggctcagaggaagcgtcccagagagaaggaggatgaaaaa
gaggaggatgaaaaagaggaggatgaggggttgacggctgctgccacacccaagagaagg
gtgatcaaactgaccagcatcaaggatctgagagcagagatcacagagaacacacacaga
ggtctgcaggagatgctgcagaaacactcgttcgttggctgcgtggatccgcagtggagt
ctgatccagcatcacactaagctctacctgctcaacacaaccacactcagtcgggagctt
ttctaccaaattctcatctttgactttgggaactttggcgtcctcagactgtctactccg
gcaccgctgtacgaactggccatgctggcgctggactcggcggagagcggctggacggag
gaagacgggccgaaggagggcctggctcagtacatcgtggacttcctgaagaagaaggca
gaaatgctggaggattatttctccatggagatcgatcaggagggaaacctgacggggctg
cctctgctcctggataaatacacgcccatcatggaaggcctgcccttgttcatcctgcgc
ctcgccaccgaggtgaactgggacaatgagaaggaatgcttcagagacttcagcaaggag
tgcagcgccttctactccatcaggaagcagttcgtcctggaggccgagccgggcgacgag
ccggaatcagacgggaattcctggcgctggaatgtggaacacgttctgttcaaagcttta
cgaactctcttcagtcccccgaaaagcttcagcgaggacggcaccgtgctgcagatcgcc
aacctgcccgacctctacaaggtgtttgagcgctgctga

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