Gambusia affinis (western mosquitofish): 122842878
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Entry
122842878 CDS
T07758
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03430
Mismatch repair
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122842878 (mlh1)
03460 Fanconi anemia pathway
122842878 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122842878 (mlh1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122842878 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122842878
NCBI-ProteinID:
XP_043993092
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Position
LG13:26015972..26025891
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AA seq
732 aa
AA seq
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MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKATNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPADEYSRIVDVVSRY
AIHNSGRSFSVKKQGETVADVRTLPNASVVDNIRSVFGNPVSRELIEVGCQDQKLAFTLK
GFVSNANYSMKRCILVLFINHRLVESSALKKAVETVYAAYLPKNSHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVMESVQKHIESKLLGSNSSRTYFTQTLLPELSVSGGSEVKPS
GSSESAERVYAHQMVRTDCRAQKLDAFLQPKEKPAPDPETAGPSGSPVATRTTELDSLEL
DDADMLEVALQEPGPAGEEERSGAAEEAQRKRPREKEDEKEEDEKEEDEGLTAAATPKRR
VIKLTSIKDLRAEITENTHRGLQEMLQKHSFVGCVDPQWSLIQHHTKLYLLNTTTLSREL
FYQILIFDFGNFGVLRLSTPAPLYELAMLALDSAESGWTEEDGPKEGLAQYIVDFLKKKA
EMLEDYFSMEIDQEGNLTGLPLLLDKYTPIMEGLPLFILRLATEVNWDNEKECFRDFSKE
CSAFYSIRKQFVLEAEPGDEPESDGNSWRWNVEHVLFKALRTLFSPPKSFSEDGTVLQIA
NLPDLYKVFERC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtgattcggaggctcgatgaaactgttgtcaacaggatcgcagcgggagaa
gttatccagcgtcctgccaacgccgttaaagaattgatcgaaaactgtttggacgcaaaa
gccaccaacatccaggtgacggtgaaggacggaggcctgaagctccttcagatccaggac
aatggtaccgggatcagaaaagaagacatggagattgtttgtgagcggttcaccaccagc
aaactgcagacctttgaggacctttcagcgattgcaacctacgggttcagaggagaggct
cttgccagtataagccatgtggctcatgttaccataacaaccaagacagctgatgcaaag
tgtgcttacagagcgagctacagcgatggcaaactgaagggccctcctaagccctgcgct
gggaatcaggggacccagatcctggtggaggaccttttctataatgtgtccaccagaagg
aaggccctgaagagcccggcagatgaatactccaggattgtggacgtggtcagcaggtac
gctattcacaattcaggaagaagcttctcagtcaaaaagcaaggagagacggtggcggac
gtgaggacgcttcctaacgcgtccgtcgtggacaacatccgcagcgtcttcggaaacccg
gtcagcagggagctgatcgaagtcggctgccaggaccagaagctggccttcaccctgaag
ggcttcgtctccaacgccaactactccatgaagcgatgcatcctggttctgttcattaac
caccggctggtggagtccagcgctctgaagaaagccgtggaaacggtttacgcagcctac
ctccccaaaaactcacaccccttcctctacctcagcctggaaatcgctccgcagaacgtc
gacgtgaacgttcaccccaccaaacacgaagtgcacttcctgcatgaggacagtgtgatg
gagagcgttcagaagcacatcgagagcaaactgctgggctccaactcgtcccggacgtac
ttcactcagacgttgctgccggagctgtctgtgtccggcggttctgaagtaaaaccctct
ggatcctctgagtccgccgagcgcgtctacgcccatcagatggtccggaccgactgccgc
gcccagaaactggacgccttcctgcagccaaaggagaagccagcccctgacccagagacg
gccggtcccagcgggtcgccagtggcaaccaggacaactgagctggacagtctggagctg
gatgacgcagacatgctggaggttgcgctgcaagaacctggtccagcaggtgaagaggaa
cgcagcggcgctgccgaggaggctcagaggaagcgtcccagagagaaggaggatgaaaaa
gaggaggatgaaaaagaggaggatgaggggttgacggctgctgccacacccaagagaagg
gtgatcaaactgaccagcatcaaggatctgagagcagagatcacagagaacacacacaga
ggtctgcaggagatgctgcagaaacactcgttcgttggctgcgtggatccgcagtggagt
ctgatccagcatcacactaagctctacctgctcaacacaaccacactcagtcgggagctt
ttctaccaaattctcatctttgactttgggaactttggcgtcctcagactgtctactccg
gcaccgctgtacgaactggccatgctggcgctggactcggcggagagcggctggacggag
gaagacgggccgaaggagggcctggctcagtacatcgtggacttcctgaagaagaaggca
gaaatgctggaggattatttctccatggagatcgatcaggagggaaacctgacggggctg
cctctgctcctggataaatacacgcccatcatggaaggcctgcccttgttcatcctgcgc
ctcgccaccgaggtgaactgggacaatgagaaggaatgcttcagagacttcagcaaggag
tgcagcgccttctactccatcaggaagcagttcgtcctggaggccgagccgggcgacgag
ccggaatcagacgggaattcctggcgctggaatgtggaacacgttctgttcaaagcttta
cgaactctcttcagtcccccgaaaagcttcagcgaggacggcaccgtgctgcagatcgcc
aacctgcccgacctctacaaggtgtttgagcgctgctga
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