Gambusia affinis (western mosquitofish): 122842883 Help Entry 122842883         CDS       T07758                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:gaf00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     122842883 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:gaf03400]     122842883 (msh6) DNA repair and recombination proteins [BR:gaf03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      122842883 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II PspAA Motif Other DBs NCBI-GeneID:  122842883 NCBI-ProteinID:  XP_043993106 LinkDB All DBs Position LG13:complement(17920959..17929149) Genome browser AA seq 1375 aa AA seqDB search MAKQSSLFNFFTKSPPPVSKPKQSSSPAEADLPSSVEKSNSSPKEEARQTQSNHQQQPSK NTKVTQNKNASGGFKKLFGDKAATTENSSKCSFGAGALVWAKLEGHPWWPCMVVPQPLTG QQMRGKGRDQRIHVHFFDEPPTRGWVSTKYIRDYQGSDSSDVKPGGVFFSSKPVIRRAME LADKSFFDSPENRLKMAVCRDPSDEEEEDEEEEMELDKSTVSDEEVIDMEEKKSKVKSPK VDRRSSRSSAEQGGKSKRRRIIVASDSDGSDEEFKPEQAASTSEEEEEEVTVSSEEEEKE SSQESEADSPIKPVKRKRPADKCVSKKAKTPSTPSAGPKRAPKTITADAKSRLSAFSAPD SFESQANGSGPAGGATTWDHEKLEWLQDGRRKDGKRRRQSEDDYDPTTLYVPEDFLNRNT PGMRRWWQLKSGMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFA RFSDVLVQKGYKVARVEQTETPEMMEARCKTMAKPTKFDRVVRREVCRIITRGTQTYSVL DGAPSESQSKFLLSLKEKAEDESSGRHRTYGVCFADTSVGYFHIGQFSDDRHCSRLRTLI AHFPPAEVLFEKSNPSAETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEENYFEET AGDGFLPALLRRMTSESDSLCLSPKEGYELALSALGGCIFYLKKCLVDKELLSMANFEEY VPVDVELEKAAGPASCFSQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDSCSTPFG KRLLKQWLCAPLCNPASIRDRLDAMDDLIAAQAQAADVSELLKKLPDLERLLSKIHSIGT PLKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISAFTPASGDFRSTLLCQI ISLKTEEKGLFPDLSAELKRWETAFDHQKARTTGVITPKTGFDPEFDQALAGIKTCERDL QDYLERQKKRLGCKNMAFWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKGWKRYVTKES ERLFSELQGFEEKRDTALKDCMRRLFYNFDKNYKDWRTAVECMAVLDVLLALSRYSLGGD GPMARPQVVLPEDDDRGTPFINLTGSRHPCVTKTFFGDDFIPNDIFIGCPGNSEGDEVEG CASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLCFTPVDRVFTRLGASDRIMA GESTFYVELSETASILHHATRHSLVLLDELGRGTATYDGTAIASAVVKELAEKICCRTLF STHYHSLVEDYANNAAVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFNAARL ANLPEEVIQSGHRKAREFERSTISLRLFRKLCQFAEDAAPDNARFTSLIQLLNTL NT seq 4128 nt NT seq  +upstreamnt  +downstreamnt atggcgaaacaaagctctctgttcaacttttttaccaagtctccgccgccggtttccaaa ccgaagcagagttcctccccggccgaggcggacctgccaagctccgtggaaaagtccaac tcgtctcccaaggaggaagccagacagacgcaaagcaaccaccagcagcagccgagtaag aacactaaagttacacagaacaagaatgcaagcggaggattcaaaaaactgttcggagac aaggctgcgacgactgaaaacagctccaaatgctcatttggtgcaggagccctcgtttgg gccaaactggaaggacacccctggtggccatgcatggtggtacctcaacctctgacaggc cagcaaatgaggggcaaaggtcgggatcagcgcatacatgtccatttctttgatgaacct ccaacaagaggatgggtcagcaccaaatacattagagattaccaagggtctgacagcagt gacgttaaaccggggggggtgttcttcagcagcaaacctgtgatccgtcgtgcgatggag ctcgccgataaatcctttttcgatagtcctgaaaatcgattaaaaatggcggtctgcagg gatccatctgatgaggaagaagaggatgaagaagaagaaatggagcttgacaagtcaaca gtgagtgatgaagaggtcattgacatggaagaaaagaaaagcaaagtgaagtcacccaaa gtcgatcgacgttcttcacgttcctctgcagagcaaggaggcaaatccaagcgccgccgc atcatcgtggcatcagacagcgacggatcagacgaggagttcaaaccagagcaggctgca tccaccagcgaggaagaggaggaagaggtgaccgtgagcagtgaagaggaggagaaggag agcagccaagagtcggaagcagacagccctatcaaacctgtaaagcgcaaacgtcccgca gacaaatgcgttagtaagaaagcaaagacgccgtctacgccctcagctggacctaaacga gctccaaagacaatcacagctgacgccaaatcccgcttgtctgccttctccgccccagac agcttcgagagccaagcaaacggatccggtcccgctggaggggcaacaacctgggatcat gagaagctggaatggctgcaggatggtcggaggaaggacgggaagagacgccgtcagagt gaggacgactacgacccgactaccctgtacgtccccgaagacttcctgaacagaaacact cctgggatgcgccgctggtggcagctgaagtctgggatgtttgacacggtgattttctac aaggtgggaaagttttacgagctgtaccacatggacgccgtgataggtgtcaatgagctc ggcctgacgttcatgaaaggcacgtgggcgcactccggcttcccagaaatcggctttgcg cgtttctcagacgtgttggtgcagaagggctacaaggtggcccgcgtggagcaaacagag accccggaaatgatggaagcacgctgcaagaccatggccaagcccacaaagtttgaccgc gtcgtcagaagggaagtctgccgaattatcacccgcggtacccaaacttacagcgtgttg gacggcgctccttcagagagccagagcaagttcctcctgagcttaaaggaaaaggctgaa gacgagagttctggacgccatcgcacctatggcgtttgcttcgcagacacatcagtgggg tattttcacatcggtcagttctcagatgatcgccactgctcacggctacgcaccttaatc gcacacttcccgcctgctgaggtcctcttcgaaaagagtaacccatctgctgagacccgc aaaatcctgaaagcatctctgtcctctgcgctgcaggaagggctgaatgcagggacacag ttttgggatgctcagaagacgctgaaaaccctctcagaggagaattactttgaggagacg gctggagacggattcctccctgcgctcctgcggaggatgacctcggagagcgactccttg tgtctgtcccctaaggaaggctatgagttggcgctgtcggctttaggcggctgcatcttc tacctgaagaaatgtctggtcgacaaagagctgctctccatggccaacttcgaagagtac gtccctgttgatgtggagttagagaaagcagctggacccgccagttgtttttcccagacc cgtcagcggatggtcctggacggtgtgacactggcgaacctggagatcttccagaatggt tcagggggaactgaagggacactgttggagcgtttagactcctgctctactccgtttggt aagaggctgctgaagcagtggctctgcgctccattgtgtaaccctgcttccatcagggac aggctggacgccatggacgacctgatagcagcgcaggctcaggctgccgacgtctcagag ctgctgaagaagcttccggatctggagcggcttctgagtaaaatccacagcattggcaca cctttgaagggccaggaccacccggactccagagcggtgctctatgaggaagtcacctac agcaagcgcaagattgccgacttcctatcagcgctagaaggcttcaaaaccatgcaagag atcatttctgctttcactccggcttcaggcgactttcgctccacactgctttgtcagatt atcagcctgaagacggaagagaaaggcctcttcccagatctgtcggcagagctgaagcgc tgggaaacagcttttgaccaccagaaagcccgcaccactggggtcataacccctaagacc ggctttgatccggagttcgaccaggctctcgcaggaatcaaaacctgtgaacgggacctg caggactacctggagcggcagaagaagaggctcggctgtaagaacatggcgttctgggga accggacggaaccgatttcagatggaagttcccgacagtgtttcagagaggaacatcccc gaagagtatgaagtgaaatccaccaagaaaggctggaagcgctatgtgacgaaggagagc gagcggctcttctcagagctgcagggcttcgaggagaagagagacacggcactgaaggac tgcatgaggaggctcttctacaacttcgacaagaactacaaagactggaggacggctgtg gaatgcatggccgtgctggacgttctgctggctttgtcccgctacagtctgggtggtgac gggccgatggccagaccccaggtggttctaccagaggacgatgaccgcggcacgcccttc attaacctcaccggatcccgtcacccgtgtgtgactaaaacgttttttggggatgacttc attcctaacgacatcttcatcggttgccctgggaacagtgaaggtgatgaggtggagggt tgcgcctcatgtgttcttgtaacgggtccaaacatggggggaaaatctaccctaatgaga cagtgtggacttgtgattatcctcgctcagctcggatgctacgttccagctgagagcctt tgcttcactccagttgatcgggtcttcactcggctgggagcatcggatcgaattatggcc ggtgagagcaccttctacgtggagctcagtgagacggccagcatcctgcaccacgccacc aggcactctctggtgctccttgatgaactcggaaggggcacggctacatatgacggcaca gccatcgccagcgctgttgtgaaggagcttgctgagaagatctgctgccgcactctgttc tccacgcattaccactccctagttgaggactatgctaacaacgccgctgtgcgactgggc cacatggcatgcatggtggagaatgaatgtgaggatccgagtcaggaaacgatcacgttc ctctacaagttcatcaccggcgcttgtccgaagagctacggattcaacgcggcacggctt gccaacctgccagaggaggtcatccagtctggccacaggaaggccagagagtttgagaga agcaccatcagcctcagactgttcaggaaactctgccagttcgctgaagatgctgctcca gacaacgcacgcttcacttccctcattcaactgcttaacaccctgtag

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