Gambusia affinis (western mosquitofish): 122842999
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Entry
122842999 CDS
T07758
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
122842999 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122842999 (kcnma1a)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
122842999 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
122842999
NCBI-ProteinID:
XP_043993297
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Position
LG13:complement(12720155..12872280)
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AA seq
1311 aa
AA seq
DB search
MLAEAHGTDPHGSDSSMRTNSIDNNNNPDSSILISKMEGVVIPYTSEVPCDDYGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNPTADKTTKGPDE
KEEVAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESC
QNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNR
SWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGD
PWENFENSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE
IIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNI
SPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCGDPDAEDASNI
MRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQ
GLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKL
KLLLIAIEFKSEQRESRSRKRILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHD
DITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAY
PLSSVSVHDCATTLRAFSSAKYKYNGFVRSPADGATTPRNSGSQKEAGVRFKADCNLVED
EHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNIKRYDSTGMFHW
SPSKEIEKVILTRSEASMTVLSGHVVVCIFGDASSALVGLRNLVMPLRASNFHYHELKPI
VFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDTS
LQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGS
NIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNIL
TLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGG
CYGDLFCKALKTYNMLCFGIYRLRDAHLGTPSQCTKRYVITNPPYEFELVPTDLIFCLMQ
FDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVPPSNRQNRSSKSREAREKQNATRMNRMG
QEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcacatggcacggatccccatggaagcgacagctctatgaggacaaac
agcatcgataataacaacaatccggactcttcgatcttaatatccaagatggaaggcgtt
gtcatcccctacacgtctgaggtgccatgcgacgattatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctgctatggagg
accctgaagtatctgtggactgtctgctgccactgcaacataaaaaataaggaggctcag
aaggtgaataaccctgccaacaatccgacagcagacaagacaacaaaaggtcctgatgag
aaggaggaggtagcagcagccagcgaggtgggatggatgacttcagtcaaagactgggct
ggtgtcatgatctccgctcagacactcacaggcagggtcctggtggtgttagtctttgct
ctcagcattggagccctcggaatatactttatagactcctcagatcctatagaatcctgc
cagaacttctacaaagattttacactacaaatcgatatggccttcaacgtcttcttcctc
ctgtactttggcttgcggtttatagcagccaatgacaagctgtggttctggctggaggtc
aattcggtggtcgacttcttcaccgttcctcctgtgtttgtctctgtatacctaaacaga
agctggcttggtttaagatttctgagagcattaagactgattcaattctcagaaatatta
cagttcctaaatattttgaaaacaagcaattccatcaagctggtgaacttgtgttccatc
tttataagcacgtggctcacggcggctggatttatacatctggtggaaaactcaggggat
ccatgggaaaactttgaaaattcccagtcgctgtcttattgggaatgcgtctacttgctg
atggtgacgatgtctacagtgggttacggggatgtctatgcaaaaaccaccctgggccgc
ctgttcatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaa
atcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatggg
agaaagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaa
gacttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatt
tcccctaatcttgagctggaagccttgttcaaacgccattttactcaagtcgagttctac
cagggatcggttctcaaccctcatgatttggcccgagtaaagatcgagtcagcggatgcc
tgtctaattttggccaacaaatattgtggagatcctgatgctgaagacgcttctaacatc
atgagggtcatatccatcaaaaactatcatcccaagatcagaataataacacagatgcta
cagtatcacaataaggcccatctgctgaacattcccagctggaactggaaggaaggtgat
gatgctatatgcctggctgagctgaaagctggattcattgcccagagctgtctggcccag
ggcctgtcgaccatgctggccaatctcttctccatgaggtccttcattgagattgaggag
gacacatggcagaagtattacctagaaggagtagctaatgagatgtacacagagtatttg
tccagtgcctttgtaggcctctccttccccactgtgtgcgagttgtgctatgtgaagttg
aagctgttgcttattgccattgaattcaagtctgagcagagagagagcagaagccgaaag
cgcatcctcatcaatccaggcaatcatgtcaagctgcaggaaggaacactgggattcttt
attgctagcgatgccaaagaagtaaagcgagcatttttctactgcaaagcttgtcacgat
gacatcacagaccccaaaaggatcaaaaagtgtggctgcaaacgactgatttattccaag
atgtccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcga
gactgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctac
ccactttcctctgtctctgttcatgattgcgcaaccactttacgtgccttctcctcagct
aaatataagtataatggatttgtcagatcaccagcagatggcgctacaacaccacggaac
agtggaagccaaaaagaggctggcgttcgattcaaagctgattgcaatctagttgaggat
gagcatccatcgactctctcacccaaaaaaaagcagcgcaatggggggatgcgaaactcg
cccaactgctcgcccaaaatgatgagtcgacatgatcccctcctaattcctggaaatgaa
caaattgagaacatggacatgaacatcaagaggtacgactcgacggggatgtttcactgg
agcccttccaaagaaatcgagaaagtcatcctgactcggagtgaagcctccatgactgtg
ctgagcggtcatgtagtggtctgtatatttggggatgcctcgtccgctttggtggggctg
cgaaacctggtgatgcctttaagagccagcaattttcactaccatgaactaaagcctata
gtttttgtgggctcgctggaataccttcggagagagtgggagactttacacaacttcccc
aaggtctccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaacatc
aacctctgtgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatacctct
ctgcaggataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgac
agcattggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggtca
tctccagacagcagtccagtacatggctttgtgcgtcaggcttcggtaaccaccggatcc
aacatccccatcatcacagaactagtgaatgactcgaacgttcagttcctggaccaagac
gatgacgacgacccagacacggaactgtacctcactcagcccttcgcctgcggcaccgcc
tttgctgtcagtgtactcgactccctgatgagtgcgacatacttcaacgataacatcctc
acactaatccggacactagtcacgggaggagccacgccagagctggagggcctgctggct
gaggagaacgctctcagaggaggctacagcacgccacagacgctggccaacagagacagg
tgtcgcgtcgcccagctggccctgtatgacggcccgtttgctgacttaggggacggtggc
tgctacggcgacttgttctgtaaagccctgaaaacatacaacatgctatgttttgggatc
tacagattaagagatgctcatctcggcacaccaagccagtgcacaaaacgatatgtgatc
acaaaccccccgtacgagtttgagctggtgcccacagacttgatcttctgcctcatgcag
tttgaccacaacgctggccagtcacggacaagcttatcccactcttcccactcctcccat
tcctccagcaaaaagagttcctcagtgcactctgtgcctccctccaacaggcagaaccgc
agcagtaagagcagagaggcaagggaaaaacagaatgcaacaaggatgaatagaatgggc
caagaaaagaaatggtttacagatgaaccggaaaatgcctacccaaggaacattcagatc
aagcccatgagcactcacatggccaaccaagtcaaccaatacaaatccactagtagcctg
attccaccaatcagagaagttgaagatgaatgctga
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