Gambusia affinis (western mosquitofish): 122843028
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Entry
122843028 CDS
T07758
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a isoform X1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122843028 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122843028 (lrit1a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
Ig_2
C2-set_2
LRR_14
LRR_5
eIF-4B
LRR_EndoS
C2-set_3
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
122843028
NCBI-ProteinID:
XP_043993383
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All DBs
Position
LG13:complement(13523647..13528880)
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AA seq
648 aa
AA seq
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MFRVLLLGLCVATLELPSPVSSCPSQCSCFYHNLSDGSKARSVICNDPDISLVPVGFPVD
TSKLRIEKTAIQQIPSEAFSYLSSLEFLWMSFNTLSALSPESFRGLFNLEELRLDGNALT
AFPWESLMDMPSLRLLDLHNNQLTSLPAEATTYIKNLTYLDLSSNSLLTLPIEVLTNWLA
TKPVQGPESSKMILGLHDNPWVCDCRLYDLVQFQKSPTLSVAFIDTRLRCSAPESFSGVL
FSDAELRQCQLPRVHTAVARVRSAVGNNVLLRCGTIGVPVPDLTWRRADGQMLNGTVQQE
TSKEGITWSILSVPAVSYRDSGKFICKASNYAGNAEAVISLVVSNPPRPEGNQTNTDKKV
KVKKPNPVGKAAYQEKLVARYVVPTSTSSALAAMDSDMLPADSEQVSYTLTDGATQDPST
SPNSDALLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKNTTA
FSVLYAVFGERDMRKINVGAGQTRVTIDGLVPRTKYIACVCVKGLIPKKEQCVIFSTDEA
ASATGTQKLINVIVITVACIIAVPLTVIVCCGALKRRIKKYWGKKSKDIQDSYVTFETLS
PGTKAKGLEGEYLNRLNQEESNRLLSARSSLDSESTAKIEGQPNEYFC
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcgtcctgctcctggggctctgcgtggccacgctggagcttccctccccagtg
agctcctgtccttcgcagtgcagctgtttttaccataacttgagtgacggatccaaggct
agaagcgtgatatgcaatgatcccgacatatctcttgtgccagtcgggtttcctgttgac
acatccaaactgcggatcgagaaaacagccatccagcaaatcccaagcgaagccttcagc
tacctctccagtctggaattcctctggatgtctttcaacaccctgtcggctctgagcccg
gaaagctttcggggactgttcaacctggaagagcttcgtctggacgggaatgccctcact
gcctttccctgggagtctctcatggacatgcccagcctcagacttcttgatttgcacaac
aaccagctcacctcgctgcccgcggaagccaccacatacatcaagaacctcacctacctg
gacctgtccagcaacagtttgctgaccctgccgatcgaggtgctgaccaactggctggct
acaaagcccgtgcagggccccgagagctccaagatgattcttggtctccatgacaacccc
tgggtgtgcgattgccgactctatgacctggtccagttccagaagtcccccacgctttcc
gtggcatttattgacacaagactccgctgttcggcaccagagagcttctcaggggtcttg
ttcagcgatgcagagctgcgtcagtgtcagctcccacgcgtccacacagcagtggcacga
gtccggagtgcggttgggaacaatgttctccttcgctgtgggaccattggcgtaccggtg
ccagatctgacatggcgcagggctgatggacaaatgcttaatggaacagtacaacaagag
acatctaaagaaggaatcacctggtccatcctcagcgtcccagctgtgtcctaccgcgat
tcaggaaaattcatctgcaaggcatcaaactatgcagggaatgcagaggctgtcatttct
ctggttgtctctaacccaccaagacccgaagggaaccagacaaacaccgacaagaaggtc
aaagtcaagaagccaaacccagtgggtaaagcagcctaccaggagaaactggtggccaga
tatgtagttccaacttccacctcatcagctttggctgctatggattctgacatgttacct
gctgactccgaacaggtcagctacaccctaactgatggagccacccaggatccctccaca
tcccccaactcagatgcactactggatctggagaagacaaatctcagcaacctggcggcg
aacacttcatccttacagcaggacccagacagggtggtccgctctgtgaaggtggtgggt
gacactgacaatacaatatctctgaactggagagcacctaaagcaaagaacacaactgcc
ttcagtgtgctgtatgctgtgtttggggagcgggacatgagaaagatcaacgttggagcg
ggacaaacccgtgtaactatagacgggttggtgcccaggacgaagtacattgcctgtgta
tgtgtgaaggggctcattcccaagaaggaacagtgtgtgatattttctactgatgaagca
gctagtgcaactggcacccagaagctgatcaatgtgattgtgatcactgtggcctgtatc
attgcagtccccctcactgtcattgtgtgctgtggggcgctgaagaggcgcattaaaaag
tactggggaaagaaatccaaagacattcaagactcatatgtgacttttgaaacactgtcc
cctggcacaaaggccaaagggcttgagggtgagtacttaaacagactgaatcaagaggag
tccaacagattgctgtcagcccgctccagcctggactccgagtcaacagcaaagatcgag
ggacaacctaacgagtacttctgctga
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integrated database retrieval system
