Gambusia affinis (western mosquitofish): 122843142
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Entry
122843142 CDS
T07758
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122843142
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122843142
03041 Spliceosome [BR:
gaf03041
]
122843142
Protein phosphatases and associated proteins [BR:
gaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122843142
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122843142
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122843142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
122843142
NCBI-ProteinID:
XP_043993616
LinkDB
All DBs
Position
LG14:1736979..1761204
Genome browser
AA seq
732 aa
AA seq
DB search
MSRFNNNRGGYGMNQFQPRRGGGPGGPMRGGLMGNPHYRNHPFQNSNQNRRGGNNHFGGS
NSQNSQQKSAQNQSKPIIPPPSPGPALTMKGPMEQQKPPAQQEQQKQNPPADQSKTQTST
PKPETTPAQANQNQQIKTPAGNANAPPPPPQQQTPQQNPKPSPQQGQKPAPQQSPKTVPQ
QSPKPGPQQNQKPGPQQNQRPGPQQNQRPGPQQNQRPGPQQNQRPGPQQNQRPGPQQNQR
PGPPQNQRLGPQQNQRPGPQQASRPGQQQGQRTGPQQGNKSGPGQGSGPKPPQRVEPMAE
QKPKEEPNKSVPDEAGTFKAALSMLLKPGEKSYTQRCRLFVGNLPNDITDDDFRKLFVKY
GEPSEVFVNKGKGFGFIRLESRALAEIAKAEMDDYPMKGRPLRVRFATHSAALSVKNLSQ
FVSNELLDEAFSQFGLVERAVVVVDDRGRSAGRGIVEFASRAAAKKALDRCNEGVFLLTA
SPRPVVVEPLEQFDCDDGLPEKFVQKNPKFQVAREHPPRFPRPGSFEFEYSKRWKSLDEM
EKQQREQVEKNMREAREKLESEMEDAYHEHQANMLRQELLRRQEELRRMEELHNQEMQKR
KEMQLRQEEERRRREEELLRKREMEEQIRRQREENYRMGNFMDRDVDIRMHTGGSLGMGD
MAFSGSNQNFPMSGLGFEGQSGLGSSPGGMMTSEMQRSERYAQGGARGMGAGAAAYGRVR
EEFDGPIKKPRF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgattcaacaataaccgtggtgggtacgggatgaatcaatttcagccacgccga
ggcggaggtcccggtggccctatgcgtggcggcctaatgggaaacccgcattaccgaaac
caccctttccaaaactccaaccagaaccggaggggaggcaacaaccacttcggtggatcg
aatagccagaattcccaacagaagtctgcgcaaaaccagtcgaagccaattattcctcca
ccgagccccggaccggccctcaccatgaaaggcccgatggagcaacagaaaccaccggcc
cagcaggagcagcagaaacagaaccctcctgcggaccagtcgaagacccagacttcaact
ccaaaacctgaaacgacccccgctcaggccaaccagaaccagcagatcaagactccggct
gggaatgccaacgcaccgccgccgccgccacagcagcagactccacagcaaaacccgaaa
ccgagtccacaacaaggccagaaacccgcaccgcaacagagccccaagacggttccgcag
cagagcccgaaacccggtccccaacagaatcagaaacccggcccacagcagaaccagaga
cccggtccacagcagaaccagagacccggtccacagcagaaccagcggcctggaccccaa
cagaaccagcggcctggaccccaacagaaccagcggcctggaccccaacagaaccagcgg
cctggacccccacagaaccagcgacttggtccccaacagaaccaacggcccggtccccaa
caggcctctagaccaggccaacaacagggccaaaggactggtccccaacaaggcaacaag
agcggcccaggccagggttcgggccctaagccgccccagagggtggaaccaatggccgaa
cagaagccgaaagaggagcccaacaagagcgtaccagatgaagcagggacattcaaggca
gccttgtccatgttgttgaagcctggagaaaagtcctatacacagagatgccgtctgttt
gttggtaacctgccaaatgacatcacagatgatgatttcagaaaactttttgtgaagtat
ggagaaccttcggaagtctttgtcaacaaaggaaaaggcttcggcttcatcagactggag
tctcgggccctggcagaaatcgctaaagctgagatggatgactatccgatgaagggcaga
ccgcttcgtgttcgttttgctacacactctgctgcgctgtctgtgaagaatctttctcag
tttgtttccaacgagctcctggacgaagccttctctcagtttggcctggtcgagagggct
gttgttgtcgttgatgatcgtggacgctctgcagggcgcggcattgtggagtttgcttcc
agagctgctgctaaaaaggctctggaccgatgcaacgagggcgttttccttctcacagcg
tcgccccgtcctgtagttgttgagcctctggagcagtttgattgtgatgatgggcttcct
gagaaattcgtccagaaaaacccaaaatttcaagtagcgcgtgagcatcctccacgcttt
ccccgccccggctcttttgaatttgaatattcaaaacgttggaagtctctggatgagatg
gagaagcagcaaagggagcaggtggagaagaacatgcgtgaagctcgcgagaaactggag
agcgagatggaagacgcttaccatgagcatcaggccaacatgctgcggcaggaactgctg
aggcggcaggaagagctgcggcgcatggaggaactgcacaaccaagaaatgcaaaagaga
aaggaaatgcagctcagacaggaagaagaacggcgccgacgggaagaagagcttctcaga
aagagggaaatggaggaacagatacggcgtcagcgtgaagaaaactaccgaatgggaaac
ttcatggatagagacgttgacatacggatgcacaccggtggctccctgggcatgggagac
atggccttcagcggatccaaccagaactttccgatgagtggcctcggctttgagggtcag
tctggactgggatcgtctccaggaggcatgatgaccagtgaaatgcagcgcagcgagcgc
tacgcccagggcggcgctagaggaatgggcgctggtgccgcagcgtacggccgcgtccgt
gaggagtttgatggccccattaagaaaccccgtttttaa
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