Gambusia affinis (western mosquitofish): 122843176
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Entry
122843176 CDS
T07758
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122843176
Pattern recognition receptors [BR:
gaf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122843176
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
TIR
TIR_2
LRR_5
LRR_9
LRR_LRWD1
LRR_EndoS
LRR_NXF1-5
ThsB_TIR
2TM
Motif
Other DBs
NCBI-GeneID:
122843176
NCBI-ProteinID:
XP_043993686
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All DBs
Position
LG14:5995596..6002771
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AA seq
952 aa
AA seq
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MGNPNQSVILPLHFSFAGDYLQIIIMASVNTSSFYFILNLFFLLLPVNPLLAFSLKNCTI
LYKENVSADVSVDCRNMNFVTVPDYIPKNTVSIQLGHNQLLNINLKDFGGRSKLKHLNLT
VNEIAYVEPGSFIDLVLLETLDMGNNKLTSLTANMFQGLSSLTVLVLSKNKIQQIHESAF
QCLAHLQTLDIAFIPLTKVAEIQPFFYLPQLLTLNLKYIRFTTFDTKHLPLNLSLSLEVL
EISTSNLKVLAIIGPISPYLQTIDFLLTDGVKQVLLDKSLLKNITNLDVAPTVDSFEGIH
EVLGSLERLRVINFGSVDDWIAKGLLPAVCKVQTLEKLTISQTHFHNFITDLASCAQLRE
LNLEDTFMFKLSKGSMQTMTQLQFLNLGYNMLTEVPEDIKSLSTLEILILCENDISVLKC
DDFSNTTRLKELYLNGNRITQLERCITENLINLKVLDMSNNLMKTFGDSFKISLQKLETL
DISRNPIKYLETDVFQYMEALKELKVETYHFVDVPYFSGLENIENITIYLHTDMTSLSLQ
SNNDKPFSDVKTMKQLTLIGSSITQWMPFHTIREMLRAYGDLGTVVILNIYLNYYEVETF
ELNLQLKSLTLSLTDLSYLSSKFFLLLPNLQNLDLSKSKLRSLDFLVQANLSALRYLNLT
GNEINVISETVFQSLPSLRFLDLDNNPFSCDCSNAGFIHWVVTNPQTQVVNAHQYKCFFP
VDKQEGLLLEFDVQSCRDDGRFLYFISSTCLVVLTLLSSFIYNFLRWHLTYTFHLFRAFL
YDSRKGRKKDPHRFDAFVSYNVHDEGWVYREMLPVLEGQQGWRLCLHHRDFQPGKPIIEN
ITDAIYSSRKTICVISSSYLQSEWCSREIQMASFRLFDEKKDVLILLFLENIPSRHLAPY
YRMRKLVKKRTYLSWPQAAQHPGVFWQNVQRALQTGGALTEDTDLLTGPAGL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatcctaaccaaagtgttattcttccactacatttttcttttgcaggtgattat
cttcaaataataatcatggcctctgtaaatacttcatccttctactttattcttaatctt
ttctttctgctgcttcctgttaaccctttgctggcgttttcattgaaaaactgtacaata
ctttacaaggagaacgtctctgctgatgtttctgtggactgtagaaacatgaactttgtg
actgtcccagattacatccctaaaaatactgtgtcaatacaacttggacacaatcagctc
ttaaatattaatttaaaagactttggcggcaggtcaaagctgaaacatctgaatttaaca
gtgaatgaaattgcttatgttgaaccagggtcatttatcgacttggttttattggagaca
cttgatatgggaaataacaaacttaccagtctgacagccaacatgtttcaaggcctgtcc
agcctcacagttctggtcctcagcaaaaacaagatccagcagattcatgaatctgctttc
cagtgtttggcccacttgcaaactcttgatatcgcctttattccacttacgaaagttgca
gaaattcaaccattcttctatctcccacagttacttacacttaacctaaaatacatcaga
tttactacttttgacaccaaacatctccctttgaatctctccttgagtcttgaagtgttg
gaaatttctacttctaacttgaaagtcttggccatcattgggccaatttccccttacctc
cagacgatagacttcttactcacagatggtgtaaaacaggtgttacttgacaaaagctta
ctaaagaacataacaaacttggatgttgccccaacagtggattcctttgaaggaatccat
gaagttctgggaagtcttgaaagactcagagttataaattttggaagtgtggatgattgg
attgcaaagggccttctacctgcagtctgcaaggtacaaacacttgagaagcttactatt
tcccaaacccattttcacaattttattactgaccttgcatcgtgcgcccagctcagagaa
cttaacctggaagatactttcatgtttaaactgtcaaaaggttcaatgcaaacaatgacg
caactgcaattcctaaatttgggttacaacatgctcaccgaagttccagaggacataaag
agcctctctactcttgagattctgattttgtgtgaaaatgacatctctgtgttgaaatgc
gatgatttttccaacaccacacgtctgaaggaactttacctgaacgggaaccgcataacc
caactggaaaggtgtattactgaaaacctcatcaatctaaaggttttggatatgagtaac
aatctgatgaagacattcggagactctttcaaaatttccctgcagaaacttgagacctta
gatatcagccgcaaccccataaagtatctggaaacagatgtttttcaatatatggaggct
ctcaaagaactgaaggtggaaacctatcattttgtagacgtaccttatttcagtggttta
gagaacattgaaaatataacaatctacttacatacagacatgacttccctaagtcttcaa
tcaaacaatgataaaccctttagtgatgttaagacaatgaagcagctaactttaatcgga
agcagcattacccaatggatgccctttcatacaattagggaaatgctcagagcttatgga
gatctgggaaccgttgtgattttgaatatctatttaaattattatgaagtggaaacattt
gagctgaacctccagctaaaaagtctgacgttatcattgacggatttgtcctacttaagc
tctaaattcttcctgctactcccaaacctgcagaacctggatctctccaagtctaaactc
aggtctttggattttctggtccaggccaacctttctgctctcagatatttgaacctaact
ggcaatgagatcaatgttattagtgagacagtcttccagtctctaccctctctgagattc
ttggatctagacaacaacccgttctcatgtgactgttcaaatgcaggcttcatccattgg
gtagtgaccaacccccaaacccaggtggtgaacgctcatcagtataaatgtttctttcct
gtggacaaacaagaaggcttgttactagaatttgacgttcagtcatgtcgagacgatggc
aggtttctatacttcatttccagcacttgtctggttgttctgactctcctctcatccttc
atctataacttcctgaggtggcatctcacctacaccttccacctcttccgagcctttctc
tacgacagcaggaaggggagaaaaaaagacccacatcggtttgatgcctttgtgtcgtat
aacgtccatgatgagggctgggtttacagagagatgcttccagtgttggagggacagcag
ggctggagactctgtctgcaccacagagacttccaaccaggtaaacccatcatagagaac
atcactgatgccatctacagcagcaggaaaaccatctgtgtgatcagcagcagctacctg
cagagcgagtggtgctccagagagatccagatggccagctttcgcctgtttgatgagaag
aaggacgttcttattctgctgtttttagaaaacattccttctcgtcatctggctccatat
taccgcatgaggaagctggtgaagaaacgcacctacctgagctggcctcaggctgcacaa
catccgggagttttctggcagaacgtccagagagctctgcagacagggggcgctctcact
gaagacacggacctgctgaccggaccggcaggactttga
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