Gambusia affinis (western mosquitofish): 122843177
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Entry
122843177 CDS
T07758
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122843177
Pattern recognition receptors [BR:
gaf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122843177
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_NXF1-5
LRR_LRWD1
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
122843177
NCBI-ProteinID:
XP_043993690
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Position
LG14:5988482..5994793
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AA seq
945 aa
AA seq
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MAARGSVFSLLCLLLHTNLSLPYSLKNCTIYHEESSSAEVSLDCANRKLVTIPDDILKDA
VSVKLGHNLIQRVHQGDFCGMSKLKILDLEYNLVVQVDDGSFTDLVSLEALNMGRNRLTN
LTSNVFQGLSSLTALDLSQNRIQFIHDSAFRVLTSLQSVNFQGNMLQRIVDIQPILQLPQ
IHTIDLTYNLFYSFETKDLHLNFSSSLKELSVHSHKLIKFGITTPIFPHLHKLYLSMSSN
SSSRWDLPDKPLLNNVTHLCLDMLPLSNEEIQEALQTFDSIYHLRLHFLHIQIRDGLLAI
ACKIPTLRKLDLSEIDFSNYTLDLAQCSQLTDLDLSICLISELPQGSLDSMRQIRFFNMS
YNKLIKIPHDIRSLSSLEILIMNDNSISQLGCEDFVNTTHLTELHLNGNRIAKLQRCVME
SLTNLKLLNLSDNLLVTFRASTKVGLQKLEILDLSQNFIKFLNNYDFRGLRSLKHLNVTS
YFRENVKSFAFLGLKSLKSFSGSFPLFFINLKTVPQLEKIQVNFNFNGPFRTPYLKTYED
SIRMKSLKSVSVACRYDHQGVVYNLAEGLFHKMKHLEYFKAENVYLSAPYSDTFQFNQKL
RSLIFTKTDLSELQSELFLPIPNLESLDLSESQLKSLDFLVHVNLSALRYLKLTGNQLNV
INKTVFQSLPSLTFLDLDKNPFTCECSNADFIQWVKSNTQTQVVNAHQYECSFPVSRQGS
LLLDFNFQSCLDDGGFLCFISSSCLVVLTLLSSFIYHFLRWHLTYTFHLLLAFLYNSRKG
RKRDLHQFDAFVSYNVRDEGWVYREMLPVLEGQQGWRLCLHHRDFQPGKPIIENITDAIY
GSRKTICVISRSYLQSEWCSREIQMASFRLFDDKKDVLILLFLEEIPAHQLSPYYRMRKL
VKKRTYLSWPQAAQHPGVFWQNVQRALQTGGAVAEDTDLLTGPEG
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagaggaagtgtgttttcacttctctgcctcttgcttcataccaatctttcg
ctgccttactcattgaaaaattgcacaatatatcatgaggaaagttcctctgctgaggtt
tcgctggactgtgcaaacaggaagcttgtgactatccctgacgacatcctgaaagatgca
gtttcagtaaaacttggacacaacttaattcagagagttcaccaaggagatttttgtggt
atgtcaaagttgaaaatcctggatcttgagtacaatctagtggttcaggtggatgatggc
tctttcaccgatctggtgtcactggaagctctcaacatggggagaaaccgtctcaccaac
ctgacgagcaacgtcttccagggcctgtccagcctcaccgcgctcgacctctctcagaac
cgcatccagttcatccatgactctgcgtttcgggttttgaccagcttacaaagtgtgaac
ttccagggaaatatgctccaacgaattgttgacattcagcccatcctacaactaccacaa
attcacaccatcgaccttacttacaatctattctactcttttgaaacaaaagatctccat
ctgaatttttcttcaagtcttaaagagttgtctgttcacagtcataaactcataaaattt
ggcatcacaacaccaatttttcctcatctccataaattatacctttctatgtcttcgaac
agtagttcacgatgggatttaccagacaaaccattactaaacaatgtgacacatctgtgt
cttgacatgcttccactttccaatgaggagattcaagaagccctgcagacttttgactca
atttatcacctacgactacattttctacacatccagattagggatggactgttggctatt
gcctgcaaaataccaacattgagaaagctggatttgtctgaaatcgatttcagcaattat
actcttgatcttgcacaatgctctcagctcacagatcttgatctgtccatttgtctaata
agtgaacttccacaaggatcactggactcaatgaggcaaattaggttttttaacatgagc
tacaacaagctcataaaaatcccgcatgacatcaggagcctctcctcccttgagatcttg
attatgaatgataatagcatttcccaattaggctgtgaggattttgtgaacaccacacat
cttacagaactacacctaaatggtaacaggattgccaagctgcagagatgcgtcatggaa
agtcttactaacctgaagcttttgaatttgagtgacaatttgctcgtgacgttcagagcc
tccaccaaagttggcctacagaagcttgagatcttggatttaagtcaaaactttataaaa
tttcttaacaattatgatttccgaggcttacggtccttgaagcatttgaatgtgacatca
tactttagggaaaatgtaaaatcttttgcatttttgggactaaaaagcctaaaatcgttt
tctggatcatttccactattttttataaatttgaaaactgtgccacagttggaaaagatt
caagtcaacttcaatttcaatggacctttcagaactccttatttaaaaacctacgaagac
tccatcaggatgaaatcattaaaaagtgtctcggtggcctgcaggtatgatcaccagggt
gtggtctacaacctggcagaaggactctttcacaagatgaagcatctggaatattttaaa
gctgagaatgtttatttgagtgctccatactcagacacgtttcagttcaatcagaagctg
aggagtctgatatttacgaagacggatttgtcagagttacaatctgaactgtttcttcca
atcccaaacctggagagtctcgatctctccgagtctcagctgaagtctttggatttcctg
gtacacgttaatctttctgctctcagatatctcaaactgaccggcaaccagttaaatgtg
attaacaagacagttttccagtctcttccctctctaacgttcttggacctggacaaaaat
ccgttcacctgtgaatgctcaaatgcagatttcatccagtgggtgaagagcaacacgcag
acccaggtggtaaacgctcatcagtacgaatgctcctttcctgtgtccagacaggggagc
ctgttgctggactttaatttccagtcctgtttggatgatggcgggtttctctgcttcatt
tccagctcttgtctggttgttctgactctcctctcatccttcatctaccacttcctgagg
tggcatctcacctacaccttccacctcctcctggcctttctctataacagcaggaagggc
aggaagagagaccttcaccagtttgacgcctttgtgtcgtataacgtccgtgatgagggc
tgggtttacagagagatgctccccgtgttggagggacagcagggctggagactctgtctg
caccacagagacttccagccaggtaaacccatcatagagaacatcactgatgccatttac
ggcagcaggaaaaccatctgtgtgatcagccgcagctacctgcagagcgagtggtgctcc
agagagatccagatggccagctttcgcctgtttgatgacaagaaggatgttctgattctg
ctgtttctggaggagattcctgctcatcagctgtctccatactaccgcatgaggaagctg
gtgaagaaacgcacctacctgagctggcctcaggctgcacaacatccgggagttttctgg
cagaacgtccagagagctctgcagacagggggcgctgttgctgaagacacggacctgctg
accggaccggaaggatga
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