Gambusia affinis (western mosquitofish): 122843178
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Entry
122843178 CDS
T07758
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122843178
Pattern recognition receptors [BR:
gaf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122843178
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
122843178
NCBI-ProteinID:
XP_043993694
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Position
LG14:5971504..5979663
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AA seq
942 aa
AA seq
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MALLSNFILRLFCLLLHFNPCLTYSLKNCSILFEDNPSAGVSVDCANRDLVSIPDDIPED
AVSIELRGNNIQTIKDDFRGMSRLRYLGLRKSGITSVDDGCFNDLVSLETLMMRNNYLFT
LTANMFQGLSNLTTLDLSHSGICFIHGSAFRFLTSLKVLNLDYNTLKNTADIQPIFQLPQ
IQTLSLRCNELSSFESKNFLLNKSSSLQQLFISGGSLRKFSITTPIFPYLQVVELSTCPK
VTKLKWDISDKTLLENITQFNVEENTLSCKGVKNVLQNLISLRHFKVNMVVSWIKRGLLS
TVCKIQSLRRLDLFYNNMNNKTLKLAPCSQLTELYLQESKLDELTNGSIQSMKMLQVLNM
SDNKLTRVSDDIRSLAFLKILHLDNNFISKLDCEDFENTTRLVELNLNTNQISSLERCVL
EHLTELKHLDLGYNNLRAFGDTFKVALHKLEFLDMSENDINILSSNTFEGLQSLRHLKMA
SDNIMLMENKTFPELRNLVDLNVSFSNGYKPELQGLQRLENLIVYFGKGFTFKNPYQNKL
GGLSDLKLLKSLTVIGCTDLTFSLKILKEMLQAMGHLEAFEAVDVFEKAPDVDTFQFNPH
LSSLTLTNSDMSDLKPELFKPIPNLQRLDLTNSMLRSMDFLVQANLSALKYLKLTDNKII
TINEAVWEVLPSLTYLDLSYNLFTCECSNAGFIQWLKTNKQTQVVDAHQYKCSFPVSKEG
TLLLDFHTQSCFNDASFLCFISTTCLIVLTLLTSLVYHLLRQHLVYAFYLFLAFLYDSKR
KKKNDGHQFDAFVSYNVRDEGWVYREMLPVLEGQQGWRLCLHHRDFQPGKPIIENITDAI
YGSRKTICVISRSYLQSEWCSNEFQMASFRLFDEKKDVLILLFLEEIPAHHLSPFYLMKK
LVKKRTYLSWPLAARHPGVFWQNVQRALQAGGAVADPVQAGH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctttcaaatttcatcctgagacttttctgtctccttcttcattttaatccc
tgtctgacttattcactgaaaaactgttcaatactttttgaggacaacccgtccgctggt
gtttctgtggactgtgcgaacagggaccttgtttccatccctgacgacattcccgaagac
gctgtttctattgagctcaggggcaacaacattcagacaattaaagatgatttccgtggc
atgtctaggctgagatatctgggactgagaaaaagtggcatcacttctgtggatgatgga
tgcttcaatgatttggtttcattggaaacacttatgatgagaaacaactacctcttcacc
ctgaccgcaaacatgttccagggtctgtctaatctcaccacacttgatttaagccatagt
ggtatttgtttcattcatggctctgcctttaggttccttacaagcttaaaagttttgaac
ttggattataatacgttaaaaaacactgccgacattcagcccatctttcagctaccacag
atacagacgctcagccttagatgtaacgaactgtcgtcctttgagagcaaaaacttcctg
ctgaacaaatcctcaagtttacagcagctgtttatttctggtggctccctgaggaagttc
agcatcaccacccctatcttcccttaccttcaggtggtagaactttcaacatgtccaaaa
gtaaccaaactaaaatgggacatatctgacaaaacgttactagagaacataacgcagttt
aatgttgaggaaaacacactttcctgtaaaggagtgaaaaacgtcctgcagaatctcatc
tcattgagacattttaaagtaaatatggtggtcagttggataaagagaggactgttatct
actgtctgcaaaattcaatcactgaggaggctggatttgttctacaacaatatgaacaac
aagactttgaaacttgcaccttgctctcagctcacagagctttacctccaggaaagtaaa
ttagatgaactgacgaatggctcaatacaatcaatgaagatgctgcaggtcctaaatatg
agtgacaacaagctcactagagtttcagacgacatcaggagcctcgccttccttaagata
ttgcacttggataacaattttatctcaaagttggactgtgaggattttgagaacacaacc
cgtctcgtggagcttaatctgaacacaaaccagatttcaagtctggagagatgcgtttta
gagcatcttactgagctaaagcatttagatctgggttacaataacctgagagcatttgga
gacacatttaaagtcgctctgcataagcttgagttcttggacatgagtgaaaacgatata
aatatattatcttcaaatacttttgagggtttacagtccctaagacatttaaagatggca
agtgataatataatgttgatggaaaataaaacatttcctgaattgaggaatctggtggac
ctaaatgtctcattttcaaatgggtataaacctgaacttcaaggattgcagcgtttggaa
aatcttatcgtttactttggaaaaggctttacttttaaaaatccttatcaaaacaaactt
ggtggcttaagtgatttaaaactactaaaatctctcacagtgatcggctgcacagacctc
acctttagtcttaagatcctaaaggaaatgcttcaagctatgggacatctggaagctttc
gaagctgtggatgtgtttgagaaagctccagatgtagatacatttcagttcaacccccat
ctcagcagcctgacattaacaaacagtgacatgtccgatctgaaacctgaactgtttaaa
ccaatcccaaacctgcagagactcgatcttaccaactcgatgctgagatccatggacttt
ttggtgcaagccaacctttctgcactcaaatatctgaaactgacagacaataaaattatt
acgatcaatgaggctgtttgggaagttctcccgtctctaacatacttagacctgagctac
aacttgttcacctgtgaatgctcaaatgcaggtttcatccagtggttgaagaccaacaag
cagacacaagtagtagacgctcatcaatataaatgttcctttcctgtcagcaaagaagga
accttgctactagattttcatacacagtcctgctttaacgacgccagctttctctgcttc
atttccaccacttgtttaatcgttctaactctcctcacatccttggtttaccacctccta
aggcagcatctagtctatgcattctacctcttcctggcctttctctatgatagcaaaagg
aagaagaagaacgatggtcatcagtttgatgcctttgtgtcctataacgtccgtgatgag
ggctgggtttacagagagatgcttccagtgttggagggacagcagggctggagactctgt
ctgcaccacagagacttccaaccaggtaaacccatcatagagaacatcactgatgccatt
tacggcagcaggaaaaccatctgtgtgatcagccgcagctacctgcagagcgagtggtgc
tcaaacgagtttcaaatggccagctttcgcctgtttgatgagaagaaggatgttctgatt
ctgctgtttctggaggagattcctgctcaccacctgtctccattttacctgatgaagaag
ctggtgaagaaacgcacctacctgagctggcctctggctgcacgacatccgggagttttc
tggcagaacgtccagagagctctgcaggcagggggcgctgtcgctgatccggtacaggca
ggacactga
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