KEGG   Gambusia affinis (western mosquitofish): 122843187
Entry
122843187         CDS       T07758                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122843187 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122843187 (exosc7)
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122843187 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     122843187 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 122843187
NCBI-ProteinID: XP_043993710
LinkDB
Position
LG14:complement(8301333..8305147)
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMIANEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNQHSLD
LKSLCISPGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISSDEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKIGHRHVVDATLLEKACSVASLIISVTHRGIITCSR
KVGRGSLDPESICEMIEAGKRVGKALHPPLMKLLQQEESLGKKRQKVGFLC
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtgcaagtcagcgaggctgagaaagtttacatcctacacggaatacgggat
gatttacgggtggatggaagaggctgcgaggactacagacacatggaggtagaaacagat
gtggtgtccaacactgacggatccgctaaagtaactctgggacacactgcagttctggtt
gggatcaaggctgagatcggaaaaccgagaccgatgattgcaaacgagggatatttggag
ttcttcgttgactgctcagccaatgcaaccccagagtttgagggcagaggaggcgaagag
ctggggacggagctgagtaacaccctctacaaagtcttcaacaaccagcacagcttggat
ctgaagagcctctgcataagtcctggagagcactgctgggtgctttatgtggatgtgttg
cttcttcagtgtgatgggaatttgtacgacgccatctcagtagcgatcaaagctgctctc
ttcaacactaaaattcccagagttcacatctcatccgatgaagaaggagggaaggagatc
gagctttctgacgacccgtacgactgcatgagactcgatgtggaaaacgttccctgcatt
gtgactttatgcaagatcggccacagacacgtggtggatgccaccctgctggagaaggcc
tgctctgtggccagcctcatcatctccgtcacacacagaggaataatcacctgcagcagg
aaggtggggagaggcagcctggacccagagagcatctgtgagatgatagaggcaggaaaa
cgagtaggaaaagctctccaccctcctctcatgaagttgctgcagcaggaggagagtctg
ggcaagaagagacagaaagtcggcttcctttgctaa

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