Gambusia affinis (western mosquitofish): 122843187
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Entry
122843187 CDS
T07758
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122843187 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122843187 (exosc7)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122843187 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122843187 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122843187
NCBI-ProteinID:
XP_043993710
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Position
LG14:complement(8301333..8305147)
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AA seq
291 aa
AA seq
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MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEVETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMIANEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNQHSLD
LKSLCISPGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISSDEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKIGHRHVVDATLLEKACSVASLIISVTHRGIITCSR
KVGRGSLDPESICEMIEAGKRVGKALHPPLMKLLQQEESLGKKRQKVGFLC
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtgcaagtcagcgaggctgagaaagtttacatcctacacggaatacgggat
gatttacgggtggatggaagaggctgcgaggactacagacacatggaggtagaaacagat
gtggtgtccaacactgacggatccgctaaagtaactctgggacacactgcagttctggtt
gggatcaaggctgagatcggaaaaccgagaccgatgattgcaaacgagggatatttggag
ttcttcgttgactgctcagccaatgcaaccccagagtttgagggcagaggaggcgaagag
ctggggacggagctgagtaacaccctctacaaagtcttcaacaaccagcacagcttggat
ctgaagagcctctgcataagtcctggagagcactgctgggtgctttatgtggatgtgttg
cttcttcagtgtgatgggaatttgtacgacgccatctcagtagcgatcaaagctgctctc
ttcaacactaaaattcccagagttcacatctcatccgatgaagaaggagggaaggagatc
gagctttctgacgacccgtacgactgcatgagactcgatgtggaaaacgttccctgcatt
gtgactttatgcaagatcggccacagacacgtggtggatgccaccctgctggagaaggcc
tgctctgtggccagcctcatcatctccgtcacacacagaggaataatcacctgcagcagg
aaggtggggagaggcagcctggacccagagagcatctgtgagatgatagaggcaggaaaa
cgagtaggaaaagctctccaccctcctctcatgaagttgctgcagcaggaggagagtctg
ggcaagaagagacagaaagtcggcttcctttgctaa
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integrated database retrieval system