Gambusia affinis (western mosquitofish): 122843299
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Entry
122843299 CDS
T07758
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122843299 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122843299 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122843299 (vps28)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122843299 (vps28)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122843299 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
122843299 (vps28)
Exosomal proteins of colorectal cancer cells
122843299 (vps28)
Exosomal proteins of bladder cancer cells
122843299 (vps28)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
122843299
NCBI-ProteinID:
XP_043993883
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All DBs
Position
LG14:13437946..13441493
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AA seq
223 aa
AA seq
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MFHGIAGSGGVGSAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPSEYTASCSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggatagcaggcagtggaggagtcgggtcagctccagctaacaaacctgag
ttgtatgaggaagttaaactgtacaaaaacgcacgggaacgagaaaagtacgacaacatg
gccgagttgtttgctgttgtaaagaccttgcaggcattggagaaggcttacatcaaagac
tgcgtatcacccagcgagtacacggcttcctgctccagactcttggttcagtataaagct
gctttcaaacaggtgcaaggctctgacgtgggctccatcgatgaattctgcaggaagtac
agacttgactgcccacttgcaatggagaggattaaggaagatcgaccaattaccattaaa
gacgataagggcaacctgaaccgttgcattgcagatatagtttctctcttcatcactgtt
atggacaagctgagactggagatcagagccatggatgagatccaaccagatcttagagag
ctgatggaaaccatgaacaggatgagcaacatgcctccagactctgaggcaaaggacaaa
gtgaacctctggttgaccacccttagcagcatgtctgcctcagatgagctggatgataac
caggttcgccagatgctcttcgatctggagtcagcctacaacgccttcaaccgcttcctt
cactcttcctaa
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