Gambusia affinis (western mosquitofish): 122843426
Help
Entry
122843426 CDS
T07758
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122843426
03036 Chromosome and associated proteins [BR:
gaf03036
]
122843426
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122843426
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122843426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-met
Actin_micro
LIM
zf-C2HE
zf-C2H2_6
zf-C2H2_15
DTHCT
zf-WIZ
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
122843426
NCBI-ProteinID:
XP_043994085
LinkDB
All DBs
Position
LG02:15044523..15051630
Genome browser
AA seq
756 aa
AA seq
DB search
MEGEVVSMDSAQAAALGADGKVLPEGGEALIQAAQGEVAGDMNMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATFVE
ASGTNKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQATQEEEEEDDE
VVEPEAAVPHQEDPEWSKDPDYQPIAAVRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCMGEAGGDENGDPSPKK
GRRGRKRKMQSRRDDDDDDDDDDDNTEGELDEIEDEEDEMLNEIEVEQAEPVVPIPAPVE
PPVKRKRGRPPKNKPDPAAIIRVEDEVTGEVDDIIVKKEVGAEQEEGAMEEVVVGGVKST
IQLEELSQVEGAEVQMSDAPPNGDLTPEMILSMMDR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggtcgtttccatggactctgctcaggctgctgccctgggcgctgatggg
aaggttctaccggagggcggagaagctctgatccaagcagcgcagggagaagtggccggt
gacatgaacatgatggtgatggacgcgctggatcccactctgctgcagatgaaaacagaa
gtgttggagggaggcggcactgtgacggttaccggaggagacgagggtcagatcatcaca
cttcaggtggtgaacatggaggagcaagccggtgccgcgttaggtctcggtcagcttcag
ctggtgcaggtccccgtcacaacaaccactgtagaggggctccaggccacttttgttgag
gcatcaggcactaacaaggatgcagaaccggttatctgccacacccttcctttgcctgag
ggcttccaggttgtaaaagtgggagcgaatggtgaggtggagactgtagagcaggaagag
ctccaagcagcccacgatgagctccaagcaacacaggaggaggaagaggaagatgatgaa
gtggtggaacctgaagctgctgtccctcatcaagaagacccagaatggtcaaaggatcca
gattaccagcccatcgctgctgtccgcaaagggaaaaagggcaaaaagagccgacttcgg
tatgcagagggagatcgggacatggatgtttctgtgtacgactttgaggaagaacagcag
gaggggctcctgtcagaggtcaatgctgagaaagttgtgggcaatatgaaacctccaaag
cccaccaagatcaagaaaaaaggtgtaaagaaaactttccagtgtgagctgtgtagctac
acctgtccaagacgttctaatctggatagacacatgaagagtcacactgacgagcggccg
cacaaatgtcacctgtgtggcagagccttcagaacagtcacgctgctgaggaaccacctg
aacacacacacaggcacccggccacacaaatgcacagattgtgacatggcgtttgtgacc
agtggagagttggtgcgtcatcgtcgctacaaacacacacatgagaaacccttcaagtgt
tcaatgtgtgactattccagtgtggaggtgagcaagttgaaacggcacatccgctctcat
actggggagcggccgttccagtgcagcctttgcagctacgccagcagagacacctacaag
ctgaaaagacacatgaggacacattcaggggagaagccgtatgagtgctacatctgccac
gcccgtttcacacagagcggcaccatgaagatgcacattctgcagaaacacacagaaaac
gtggccaagttccactgcccccactgcgatacggtgatcgctcgcaagagtgatctaggt
gttcacttgcggaagcagcactcgtttatcgagacggggaagaaatgtcgttactgcgac
gccgtgtttcacgagcgctacgctctgatccaacaccagaagactcacaagaacgagaaa
cgtttcaagtgcgaccagtgtgactactgctgcagacaggagcgccacatgattatgcac
aagcgtacacacacaggggagaagccgtttgcctgtagccagtgtgagaagactttccgt
cagaaacaacttctggatatgcacttcaagcgttaccatgatccaaactttgttcccacc
gccttcgtctgcagcaagtgtagcaagaccttcactcgcaggaacacaatgctgcgtcac
gcagagaactgcatgggtgaagctggtggagacgaaaacggagacccgtctcccaagaag
ggacggcgtggcagaaagaggaagatgcagagcagaagggacgacgacgacgacgatgat
gatgatgacgataacactgaaggagaactggatgaaatagaagacgaggaagatgaaatg
ctaaatgagatcgaagtggaacaagctgaaccagttgtcccaattcctgcaccagttgaa
cccccggtgaagaggaaacgtggacgccccccgaagaacaagcctgaccccgctgccatt
atccgtgtggaggatgaggtcacgggagaggtggatgacatcatcgtgaagaaggaggtc
ggtgcggagcaggaagagggcgccatggaggaggtggtggttggcggcgtcaagtcgacc
attcagttggaggagctgtctcaggtagaaggagcggaggtgcagatgagcgatgccccg
cccaacggagacctgacccccgagatgatcctcagcatgatggaccgatga
DBGET
integrated database retrieval system
