Gambusia affinis (western mosquitofish): 122843472
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Entry
122843472 CDS
T07758
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122843472 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122843472 (arid1ab)
03021 Transcription machinery [BR:
gaf03021
]
122843472 (arid1ab)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122843472 (arid1ab)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
ARID
122843472 (arid1ab)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122843472 (arid1ab)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122843472 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122843472
NCBI-ProteinID:
XP_043994177
LinkDB
All DBs
Position
LG14:complement(23247448..23314070)
Genome browser
AA seq
2292 aa
AA seq
DB search
MAAQVASVAALNTSPPSELKKPDRDPQDESVPGEKQHENRDTGPDAGSPVQKELQDGSDD
GNTGGGGDPDMKNGNGNLPRVNNNSGNQNDTGGPEGNNLPGMGHHHPGPFPPPPYGYNQP
YSRGPFPQHGGQQSPGMAAASGPGMMDPYPANSHEHGYHNNYNSYTPFQNRTSYQGQGYG
PMSSPRNNQPPAAGGQPGKQQQQQQQQPAGGTTAMAASYSNQRYNMGNQQPTSTPTLNQL
LTSPSSARSYSSYPQGDYNNQEGANKGVGDMSSTQFGGVHPGWQQRTHHPSPMSPGNTGQ
PGSRNQPPSPMDQVGKMRGQPYGGPNPYTQHQQGPSSGAGPQQGGSYPAQSYGPPGPQRY
PMGMQSRTPGTMGGMQYGQQMSAYGQQGPGGYGQQNQGYYSQHGPPPHTGQQQPPYSGQT
QGSSAAPYSQQGHPSQPPGQHAQSGPPYQQSQGPHGPAAGQPSYSQPPQPHSGQPPYVSP
QQQQQTQQQQQQGPGPQSQQGPQGQPGYQQATGPGQTPQQQTPPQQQGPPQQPGGPAPQA
QQPPGHGQQSQQSPYSQTPPLQQPPQQQQQQQQQPQQQQQQSPYQRFPPPPQELSQDSFS
SQSSAPPSNQPTKSGQEDSMQGRPSSLPDLSGSIDDLPTGTEAVLSPGVSTSGVSSSQGE
QSNPAQSPFSPHTPPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAVPGNQMPPRPPSVQ
SDSMMHSSMNQSPMGPDRVYMRNPQMPPYGSPGQPGSALSPRQSTGGQIHSGMGPYPQNN
TMGNYGPQGAQYGPQGYPRQPGYTGMPNTNYPSGPGMGGSMNPMPAQGSGSPYGSMPPGR
IGPGQMGTRPYGPGMGPNMGSMPPQVGSGMCPPPGMNRKDGGPTMHHGPANSIHNRPPGY
PNMNQGMMGSAPPYGPGMNSMHSVMNQGAPGPYPVGGNMANNTPGMAPGSEFGMDKINPA
QKINNKVDGTPKPESKKKSNSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMS
NLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATSLNVGTSSSAASSLKKQYIQC
LYAFECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSTTSSMAEGGDL
KPPTPASTPHSQMPPMPGVRSNVNLQDPFADGGDPAFSRRNTMTPNSQGYQPGMGGPEMM
SRMAPYESNKDPFGGMRKAGEQFMPPNPNSGMGEQYNRGPPGPMGNMPMGQRQQYPYGYD
RRQEPGMGPEGNMGPAAPQPSMMPSGSDAGMYSPSRPPPQQRHDSYTNQYPGQGAPPGGP
YPNQQPGMYPQQQPNYKRPVDAGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGHQGQQDMY
NQYNTYPGGERRPPGPQGQFPFPFGRDRGPSSAGPNSQSHMPPQMMTSSMPTGPDGPQGP
VWQGRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSGEEMMPSDQRINHEGQWPGHVNQRQP
PFGPASSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRSMETRTSPSKSPYMHPGIKVQKA
GPPVPASHIGQAPVQQPMIRRDVAFPPGSVEATQPHLKPRRRLTMKDIGTPEAWRVMMSL
KSGLLAESTWALDTINILLYDDGSITTFNLCQLPGFLELIVEYFRRCLIEIFGILKEYEV
GEPGQRTLIDPNAAEDSDDEIPIPECEDMDTDEEEDEDEENEEKKTNHDSSSQVKVKEEE
EESSMKDKSSEEDDEEEKKESSTKEASSSTSGSSQDPNVHLEKPKQASKFDKLPIKVVRK
KNPFRLNHLSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESQMDLLKQRKRMLPATEGR
KKVKLLGTTENPEKSKFCLEEKVQQQQAQCSDPNKASTEKSPSSLPLCAPVTATIDDVLS
ARPGSVTMEVVRGGAEEQKENGKYLFSINPDPQSRRNVKILEDEPHSKDETPLSTLSDWQ
DSLARRCICVSNIIRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKE
EEEDEGVSCDRDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVC
PSAEALDPFPTLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRL
VGERKVAVCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSS
LLQMQGGPHFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNPLVSQ
VICDVLFLIGQS
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgctgctctcaacactagcccgccatccgaactcaaa
aagccggaccgggacccacaggacgagtcggtaccgggcgagaagcagcatgaaaacagg
gacacgggacccgacgcgggatctccggttcagaaggagctgcaggacgggagcgatgat
gggaacactgggggaggaggggatcctgatatgaagaacggcaacgggaatctacccagg
gtaaataataacagcggcaatcagaatgatacaggcgggcccgaaggaaataatctgccc
gggatgggccaccaccaccccggaccctttcctccacctccctacggctacaaccagccc
tacagccggggcccttttcctcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttaccccgctaactcacacgaacacggctaccacaac
aactacaacagctacaccccgttccaaaacaggacttcctaccagggccagggatacggg
cccatgagctccccgcggaacaaccagcctccggcagctggggggcagccaggcaagcag
cagcagcagcagcagcagcagccagcaggaggaaccaccgctatggctgcctcctacagc
aaccagaggtacaacatggggaaccagcagcctacatccacgccaactttgaaccagctc
ctgacatcccccagctccgctaggagctactccagctacccccaaggagactacaacaat
caagaaggggccaacaagggagtaggagatatgagcagcactcagtttggtggggtccat
ccgggttggcaacaaaggacccaccacccctctcccatgagcccgggaaacactggacaa
ccaggcagcaggaaccagcctcccagcccgatggaccaggtagggaagatgcgaggccag
ccgtacggagggcctaacccctacacccagcatcagcagggcccttcctctggtgcggga
ccccaacagggaggctcctacccagcccagagctacggacctccgggtccccagaggtac
ccaatggggatgcagagccgcacaccgggcaccatgggtggtatgcagtatgggcagcag
atgtctgcgtatggacagcagggtccaggaggctacggccagcagaaccagggctactac
agccagcatggcccaccgccccacaccggccagcagcagcctccatactctggccagacc
cagggcagctctgctgctccctactctcagcagggtcacccttcgcaaccaccgggccaa
cacgcccagtctgggcccccataccaacaatcgcaagggccccatggacctgctgcagga
cagccttcctacagccagcccccacagccccattcaggacagccgccgtacgtctctcct
cagcagcagcagcagactcaacagcagcagcaacagggtcccggcccccagagtcagcag
gggcctcagggccaacccggttaccaacaagccaccggaccagggcagacaccccagcag
cagaccccgccacagcagcaaggaccaccgcagcaaccaggaggtcctgccccccaagcc
cagcagcccccaggtcacggccagcagagccaacagtcaccttactcccagacacccccg
ctgcagcaaccaccgcagcaacagcagcaacagcagcaacaaccacagcaacaacagcaa
cagtctccatatcagaggttcccgcctcctccacaggagctttcccaggattccttcagc
tcccagtccagtgctcctccttctaaccagcccaccaagagcggtcaggaagacagcatg
cagggccggccgtccagtctgccggatctgtccggctccatcgatgacctgcccaccggc
accgaggccgtcctgagtccgggcgtcagcacctccggtgtgtccagcagtcagggagag
cagagcaacccggcccagtcgcccttttccccgcacaccccgccccacctgccaggcatc
cgcggaccctcgccatcccccgtgggctccccggccagcgtgaccccgtcccgcagtggc
cctctgtcccctgcagctgtgccaggtaaccagatgccgccgcggccgcccagcgtccag
tcggacagcatgatgcattcttccatgaaccagtcaccgatgggcccggacagagtgtac
atgcgaaaccctcagatgcctccttatgggtcccctggacagcctggctctgccttatcc
ccacgccagtctacaggaggccagatacatagtggaatgggaccatatccccagaacaat
actatgggaaactatgggcctcagggggcccagtacggcccacaaggctatcccaggcaa
ccgggctacacagggatgcccaacactaactaccccagtgggcccggaatgggcggctcc
atgaaccccatgccggctcagggcagcgggagtccgtatggaagcatgccacccggcagg
ataggcccggggcagatgggtactcggccctacggtcctggcatgggccccaacatggga
agcatgcctcctcaggtggggtccggcatgtgcccgcctccagggatgaacaggaaggat
ggggggcccaccatgcaccatggccctgcaaactccatacacaacaggccaccaggttat
cctaacatgaaccaaggtatgatgggatcagcgcctccctatggccccggcatgaacagc
atgcacagtgtgatgaaccagggagcaccgggaccttacccagtgggtggaaacatggcc
aacaacacccccgggatggcacctggttctgagtttggcatggacaaaattaaccctgcc
caaaagatcaacaacaaagttgatgggactccaaaacctgaatccaaaaagaagtcgaac
tcttccaccatcaccaacgagaagatcacccggctgtatgagctaggcccggagccagag
aggaagatgtgggtggaccggtacctggcctttgccgaggagaaggccatggggatgagc
aacctgcccgccgtgggccgcaagcctctcgacctcttccgcctctacgtgtccgtcaaa
gagatcggcggcctcacccaggtaaacaagaacaagaagtggagggagctggccaccagt
ctgaacgtgggcacgtccagcagtgcggccagctcgctcaagaagcagtacattcagtgt
ctgtacgcctttgagtgtaagatcgagcgtggcgaggacccgcccccggacttcttcaac
acggacacaaagaagaaccaacccaagatccagcctccaagcccagctggttcagggtcc
cttcaagggccgcaaactccccaatctaccaccagttcaatggcagaaggaggagacctg
aagcctcccaccccagcctccaccccgcactcacagatgcctccgatgcctggtgtcagg
agcaatgtgaatctgcaggatccatttgctgatggtggagacccagcgttttccagaagg
aacaccatgactcccaactctcagggctaccagccaggcatgggcggtccagagatgatg
agtcgcatggctccctacgagtcgaacaaagacccattcgggggcatgaggaaagctgga
gaacagttcatgccccctaaccctaacagcggaatgggcgaacagtacaacagaggacca
ccaggtcccatgggtaacatgccaatgggtcaaaggcagcagtatccttatggatatgac
cgaaggcaggaaccaggcatgggccctgaaggcaacatggggcccgcagcgcctcagccc
agtatgatgccttctggttctgatgcagggatgtactcacccagccgtcccccacctcag
caacggcatgattcctacacaaatcaataccctggccaaggggctccccctggtggccct
tacccaaatcaacagccaggaatgtatccacagcagcaacctaactacaagcggcctgta
gatgcagggtacggccctccagccaagcgccatgagggggaaatgtacaacgttccctac
agtggtcagcagcagcctggaccccagtcctctgggcatcagggccagcaagacatgtat
aaccagtacaacacatatccaggaggagagcgcagaccaccaggcccacagggccagttc
cccttcccttttgggagagatagaggaccttcatctgcagggccaaactcccagtctcac
atgcctcctcagatgatgacaagctcgatgcctactggtcctgacggcccccagggcccg
gtatggcaaggccgcaacgagatgggctatcccaattatcccaaccgacagggacctcct
gtaccaggccagggccccgggtaccatggtatgaaccgttcaggagaggagatgatgcca
tcagaccaacgcattaaccatgaggggcagtggcccggccacgtaaaccagaggcagcct
ccatttggacctgctagttctgggccacctatgaccagacctttaccttcgacttaccag
acttctcagaaccacattcctcaggtgtcaagcccagctcccatgccccgatccatggaa
accaggacatcccccagcaagtctccctacatgcaccctggcattaaggtgcagaaagcc
ggccctccagttcccgcatcgcatatcggccaggcccctgtgcagcaacccatgattcga
cgagatgtggccttccctcccggctctgtggaagctacccagccccaccttaaacccaga
aggcggctcaccatgaaagacattggcactcctgaggcttggagagttatgatgtcccta
aagtcagggttattggctgaaagcacctgggccttggacaccattaacattttactgtat
gatgatggcagcattactacttttaatctttgccagctgcctggcttcctggagctgata
gtggagtacttcagacgctgcctcattgagatctttggcatcctaaaggagtacgaagtg
ggagaacctggtcagcgcaccctgatagatcccaacgcagctgaggactctgacgatgaa
attcccatacctgagtgtgaagacatggacaccgacgaggaagaggatgaagatgaggag
aacgaagagaaaaagaccaatcatgattcctcctcacaggtgaaggttaaagaagaggaa
gaagaaagctcaatgaaagacaagtcctcagaagaagatgatgaggaagagaaaaaggag
tcctctaccaaggaagctagtagctctacctcagggtcttctcaggaccccaacgtccac
ttggaaaagccaaagcaggctagcaagtttgataaactccctatcaaggtagtgcgtaag
aagaaccccttccgcttaaaccacttatccaagcttgggcagcgacagagttttgacagt
ggcctgatacactggagtattggcggtggcgacactactgaacacatccaaacccacttc
gaaagtcagatggatctccttaagcagcggaaacgcatgctacccgccactgaaggccgg
aagaaggtcaagctgcttgggacgacggaaaacccagagaaatctaagttctgtttggaa
gagaaggttcagcagcagcaggcccagtgttctgatcccaacaaggcctcaacagagaag
agtccttcttctcttcccctctgtgcaccagtcactgccaccattgatgacgtactgtca
gcccgaccggggtcggtgacaatggaagtggtccgtggaggtgcagaggagcagaaagag
aatggcaagtatctatttagcatcaaccctgatcctcagagtcgacgcaacgtcaaaatc
ctggaagatgagccccacagcaaggacgaaactcctctcagcactctgtcggactggcag
gactcattggcccgccgctgcatctgtgtttccaacatcatcaggagcctatcctttgtc
cccggcaacgacctggaaatgtctaaacacccgggcctcctcctgcttttgggccgtctg
gtactgctccaccacagacaccctgagcgcaaacaggcaccagtcacctatgagaaggag
gaagaagaagacgagggagtgagctgtgaccgagacgagtggtggtgggactgcctcgag
gtgttgagggagaactgcttggtcactctggccaacatctcaggccagttggacctttct
atctacccagagagtatatgcttaccactgctggatggcctacttcattgggcggtgtgc
ccctcggcagaggctttggatcccttccccacactcggcccacacagctcactttcaccc
cagagactggtcctagagaccctcagcaagctcagcatccaggacaacaacgtcgacctc
attttggccacgccaccgttcagccgcttggagaagctctatggctcgctcgtacgcctt
gtcggtgaacgcaaggtggccgtctgccgggaaatggcggtcgttttgctagctaattta
gctcagggcgacagcttagcagcgcgggccattgctgtccagaaaggcagcgtgggcaac
ctgctgggtttcctggaggacagtctagccgccacacaataccaacagagccaaagctcc
ttgcttcaaatgcagggcggtccccatttcgagcctacaagtgtggacatgatgcggcga
gcagcccgggcgctgcacgccttggccaaagtggaggagaaccactcagagttcactttg
tacgagtcgcgcctactagacatctccgtgtctccacttatgaaccctctggtgtcccaa
gtcatctgtgacgtactctttctgattggccagtcatga
DBGET
integrated database retrieval system
