Gambusia affinis (western mosquitofish): 122843501
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Entry
122843501 CDS
T07758
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122843501 (irx1b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122843501 (irx1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122843501
NCBI-ProteinID:
XP_043994228
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Position
LG14:20856257..20860412
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AA seq
442 aa
AA seq
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MSFPQLGFPQFLSASHEVYGSERPASATRDGSTEGAVSSSATAAAVGSMLGMYGSPWAAP
NYSAFLPYSGAADLALISQMSSQYELKDGPGSHPAASLPVHPAQGFYPYGQYPYGDPSRA
KTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKV
TWGRSAEDRDGRIFSSDNEDEHGKTGSDEEEEEEEIDLETVDIERPEEQRAGEPGSGKGQ
GEAGLSVREQASTESGRTQSAEAGDKLAAERSPSIPECQRAPQSKPKIWSLAETATAPDS
GSHKSTPPAAFAQQAALASAGHPALLPGHGIYTCQIGKLHNWANAALINANSILNMRSLL
GGAPPGHLPLHGAAPAPAAAAAGAGTSDSEDDSDVESSGSFSPKRDDEDSERRPDSLKSP
FQLITDRPHHGTTPQRVLTTTL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagctggggttcccccagttcctcagtgcctcacatgaggtgtacggg
agcgagcggccggcctcggccacccgggacggaagcacggagggcgcggtgagctcctcc
gctacggccgcggctgtcggctctatgctggggatgtacggaagcccgtgggcggctccg
aactacagtgcctttctgccgtacagcggagcggcggacctcgccctcatatcccagatg
agctcccagtacgaactgaaggacggcccgggctcccacccagcggcctcgctgcccgtc
caccccgctcagggcttctacccgtacggccagtacccttacggggacccgtcccgggcc
aagacggccaccagggagaccaccagcaccctgaaggcctggctgcaggagcaccagaag
aacccgtaccccaccaagggggagaagatcatgctggccatcatcaccaggatgacgctc
acacaggtctccacgtggttcgcgaacgctcgcaggcgcctgaagaaggagaacaaggtg
acctggggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggac
gagcacggcaagaccggcagcgacgaggaggaggaagaagaggagatcgatttggaaact
gtcgacatcgagaggccggaggagcagcgagctggggagcccggctccgggaagggacag
ggggaagcgggcctctccgtcagggagcaggcctccacggagagcgggaggacgcagtcg
gcggaggccggagacaagctcgcggcggagcgttcgccgagcataccggagtgccagaga
gcgccgcagagcaaaccgaaaatctggtctttggcggagaccgccacggcccccgacagc
ggctcgcacaaatctactccccccgcggcctttgcgcaacaggcggctttggcttccgcc
ggccacccggccttgctgccgggtcacggaatatacacttgtcagatcggcaagctgcac
aactgggccaacgcggctctgattaacgccaactctattctgaacatgcggtcgctgctg
ggcggcgcgccgcccggacacctgccgctgcacggagcggcgccagcgcccgccgccgcg
gcggccggggccgggacgtcggactcggaggatgacagcgacgtggagtcatcgggaagc
ttcagcccaaaaagagatgacgaggacagcgagcgcagacccgattccctgaagtctccc
tttcagctcatcactgacagacctcaccatggaacgacgccacagcgagttctgacgacg
acgttatga
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